Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.66□□□□□ -2.14
COL1A1P02452 BX248409.1-201ENST00000455497 255 ntBASIC1.66□□□□□ -2.14
COL1A1P02452 RNU6-488P-201ENST00000515918 99 ntBASIC1.66□□□□□ -2.14
COL1A1P02452 HSPE1P3-201ENST00000559254 309 ntBASIC1.66□□□□□ -2.14
COL1A1P02452 AC005730.3-201ENST00000583067 366 ntBASIC1.66□□□□□ -2.14
COL1A1P02452 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.66□□□□□ -2.14
COL1A1P02452 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.66□□□□□ -2.14
COL1A1P02452 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
COL1A1P02452 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
COL1A1P02452 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
COL1A1P02452 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
COL1A1P02452 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
COL1A1P02452 HMGB1P5-201ENST00000255320 642 ntBASIC1.65□□□□□ -2.15
COL1A1P02452 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.65□□□□□ -2.15
COL1A1P02452 AL445183.3-201ENST00000414168 502 ntBASIC1.65□□□□□ -2.15
COL1A1P02452 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.65□□□□□ -2.15
COL1A1P02452 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.65□□□□□ -2.15
COL1A1P02452 RPS6P15-201ENST00000431996 751 ntBASIC1.65□□□□□ -2.15
COL1A1P02452 IPO7P1-201ENST00000442031 636 ntBASIC1.65□□□□□ -2.15
COL1A1P02452 RPS15AP27-201ENST00000449183 343 ntBASIC1.65□□□□□ -2.15
COL1A1P02452 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.65□□□□□ -2.15
COL1A1P02452 RNU7-26P-201ENST00000458980 63 ntBASIC1.65□□□□□ -2.15
COL1A1P02452 snoU13.28-201ENST00000459235 104 ntBASIC1.65□□□□□ -2.15
COL1A1P02452 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.65□□□□□ -2.15
COL1A1P02452 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.65□□□□□ -2.15
COL1A1P02452 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.65□□□□□ -2.15
COL1A1P02452 BTF3P12-201ENST00000519620 469 ntBASIC1.65□□□□□ -2.15
COL1A1P02452 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.65□□□□□ -2.15
COL1A1P02452 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.65□□□□□ -2.15
COL1A1P02452 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.65□□□□□ -2.15
COL1A1P02452 AC023813.2-201ENST00000564321 469 ntBASIC1.65□□□□□ -2.15
COL1A1P02452 AC023824.2-201ENST00000566185 400 ntBASIC1.65□□□□□ -2.15
COL1A1P02452 AC011712.1-201ENST00000588959 234 ntBASIC1.65□□□□□ -2.15
COL1A1P02452 AC005332.10-201ENST00000612725 619 ntBASIC1.65□□□□□ -2.15
COL1A1P02452 AC004852.3-201ENST00000614131 326 ntBASIC1.65□□□□□ -2.15
COL1A1P02452 AC079395.3-201ENST00000615161 484 ntBASIC1.65□□□□□ -2.15
COL1A1P02452 HMGB1P24-202ENST00000615653 685 ntBASIC1.65□□□□□ -2.15
COL1A1P02452 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.65□□□□□ -2.15
COL1A1P02452 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.65□□□□□ -2.15
COL1A1P02452 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.65□□□□□ -2.15
COL1A1P02452 AL136372.1-201ENST00000403060 228 ntBASIC1.64□□□□□ -2.15
COL1A1P02452 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.64□□□□□ -2.15
COL1A1P02452 RPL27AP8-201ENST00000424277 446 ntBASIC1.64□□□□□ -2.15
COL1A1P02452 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.64□□□□□ -2.15
COL1A1P02452 EZH2P1-201ENST00000431167 291 ntBASIC1.64□□□□□ -2.15
COL1A1P02452 IFNA20P-201ENST00000436840 528 ntBASIC1.64□□□□□ -2.15
COL1A1P02452 snoU109.4-201ENST00000458953 143 ntBASIC1.64□□□□□ -2.15
COL1A1P02452 EIF4EP3-201ENST00000498782 656 ntBASIC1.64□□□□□ -2.15
COL1A1P02452 KLRA1P-201ENST00000503499 986 ntBASIC1.64□□□□□ -2.15
COL1A1P02452 AF131216.2-201ENST00000512316 564 ntBASIC1.64□□□□□ -2.15
COL1A1P02452 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.64□□□□□ -2.15
COL1A1P02452 AP003033.1-201ENST00000527244 415 ntBASIC1.64□□□□□ -2.15
COL1A1P02452 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.64□□□□□ -2.15
COL1A1P02452 AC068338.1-201ENST00000565567 176 ntBASIC1.64□□□□□ -2.15
COL1A1P02452 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.64□□□□□ -2.15
COL1A1P02452 MIR3616-201ENST00000584070 92 ntBASIC1.64□□□□□ -2.15
COL1A1P02452 AL391646.1-201ENST00000603860 190 ntBASIC1.64□□□□□ -2.15
COL1A1P02452 AC025588.3-201ENST00000604182 274 ntBASIC1.64□□□□□ -2.15
COL1A1P02452 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.64□□□□□ -2.15
COL1A1P02452 AP002826.1-201ENST00000608835 315 ntBASIC1.64□□□□□ -2.15
COL1A1P02452 AP005137.2-201ENST00000609238 400 ntBASIC1.64□□□□□ -2.15
COL1A1P02452 AC090116.1-201ENST00000615679 446 ntBASIC1.64□□□□□ -2.15
COL1A1P02452 AL391597.1-201ENST00000618707 694 ntBASIC1.64□□□□□ -2.15
COL1A1P02452 AC012640.5-201ENST00000623897 319 ntBASIC1.64□□□□□ -2.15
COL1A1P02452 AL133216.2-202ENST00000634512 349 ntBASIC1.64□□□□□ -2.15
COL1A1P02452 AL354685.2-201ENST00000448218 1447 ntBASIC1.64□□□□□ -2.15
COL1A1P02452 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
COL1A1P02452 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
COL1A1P02452 RNU6-819P-201ENST00000364116 107 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 U3.20-201ENST00000390909 217 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 AL355497.1-201ENST00000406262 551 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 UBE2V1P9-201ENST00000414760 368 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 RPS29P1-201ENST00000465274 159 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 AC078857.1-201ENST00000469870 667 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 FO393415.2-201ENST00000480085 343 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 AC022493.1-201ENST00000492984 337 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 AC093767.1-201ENST00000504523 156 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 AC006390.1-201ENST00000508068 283 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 SNORA70.16-201ENST00000516390 95 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 NDUFS5P6-201ENST00000529136 295 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 MIR151B-201ENST00000584249 96 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 AC107905.1-201ENST00000616204 426 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 AL449363.1-201ENST00000617815 186 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 AL356118.1-201ENST00000635272 1078 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.63□□□□□ -2.15
COL1A1P02452 TPTE2P4-201ENST00000258589 1605 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 SDAD1P2-201ENST00000441308 2028 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.63□□□□□ -2.15
COL1A1P02452 MIR421-201ENST00000365696 85 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 U3.40-201ENST00000408706 208 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.63□□□□□ -2.15
COL1A1P02452 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.63□□□□□ -2.15
COL1A1P02452 AL365400.1-201ENST00000431854 640 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 HMGN1P33-201ENST00000432945 451 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 FABP5P3-201ENST00000437960 408 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.63□□□□□ -2.15
COL1A1P02452 AC092685.1-201ENST00000447960 1243 ntBASIC1.63□□□□□ -2.15
COL1A1P02452 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.63□□□□□ -2.15
COL1A1P02452 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.63□□□□□ -2.15
COL1A1P02452 AC034244.1-201ENST00000507687 207 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms