Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 MTND4P35-201ENST00000604257 1375 ntBASIC3.35□□□□□ -1.87
HLA-DQA2P01906 AL672296.1-201ENST00000427780 2158 ntBASIC3.35□□□□□ -1.87
HLA-DQA2P01906 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DQA2P01906 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DQA2P01906 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DQA2P01906 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DQA2P01906 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DQA2P01906 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.34□□□□□ -1.87
HLA-DQA2P01906 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
HLA-DQA2P01906 TPTE2P4-201ENST00000258589 1605 ntBASIC3.34□□□□□ -1.87
HLA-DQA2P01906 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
HLA-DQA2P01906 Y_RNA.86-201ENST00000363020 111 ntBASIC3.34□□□□□ -1.87
HLA-DQA2P01906 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.34□□□□□ -1.87
HLA-DQA2P01906 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.34□□□□□ -1.87
HLA-DQA2P01906 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HLA-DQA2P01906 RNU6-817P-201ENST00000391083 104 ntBASIC3.34□□□□□ -1.87
HLA-DQA2P01906 RNU6-1197P-201ENST00000391183 107 ntBASIC3.34□□□□□ -1.87
HLA-DQA2P01906 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.34□□□□□ -1.87
HLA-DQA2P01906 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DQA2P01906 RNU6-628P-201ENST00000410675 107 ntBASIC3.34□□□□□ -1.87
HLA-DQA2P01906 RNU6-387P-201ENST00000411331 105 ntBASIC3.34□□□□□ -1.87
HLA-DQA2P01906 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DQA2P01906 AC138393.2-201ENST00000414742 246 ntBASIC3.34□□□□□ -1.87
HLA-DQA2P01906 CALM2P2-201ENST00000428512 440 ntBASIC3.34□□□□□ -1.87
HLA-DQA2P01906 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DQA2P01906 HMGB1P12-201ENST00000438594 598 ntBASIC3.34□□□□□ -1.87
HLA-DQA2P01906 SNORA71B-202ENST00000439232 272 ntBASIC3.34□□□□□ -1.87
HLA-DQA2P01906 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DQA2P01906 RNU7-180P-201ENST00000459240 63 ntBASIC3.34□□□□□ -1.87
HLA-DQA2P01906 AP001086.1-201ENST00000494882 321 ntBASIC3.34□□□□□ -1.87
HLA-DQA2P01906 FCF1P3-201ENST00000496394 590 ntBASIC3.34□□□□□ -1.87
HLA-DQA2P01906 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
HLA-DQA2P01906 APOOP4-201ENST00000513530 597 ntBASIC3.34□□□□□ -1.87
HLA-DQA2P01906 MTCO1P35-201ENST00000515270 228 ntBASIC3.34□□□□□ -1.87
HLA-DQA2P01906 RN7SKP122-201ENST00000515923 296 ntBASIC3.34□□□□□ -1.87
HLA-DQA2P01906 RNU6-914P-201ENST00000516749 109 ntBASIC3.34□□□□□ -1.87
HLA-DQA2P01906 RNU6-685P-201ENST00000517088 95 ntBASIC3.34□□□□□ -1.87
HLA-DQA2P01906 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.34□□□□□ -1.87
HLA-DQA2P01906 CASP1P1-201ENST00000526345 212 ntBASIC3.34□□□□□ -1.87
HLA-DQA2P01906 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DQA2P01906 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DQA2P01906 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DQA2P01906 AP005205.1-201ENST00000563503 508 ntBASIC3.34□□□□□ -1.87
HLA-DQA2P01906 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DQA2P01906 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.34□□□□□ -1.87
HLA-DQA2P01906 AC060780.3-201ENST00000589464 80 ntBASIC3.34□□□□□ -1.87
HLA-DQA2P01906 BNIP3P9-201ENST00000603714 553 ntBASIC3.34□□□□□ -1.87
HLA-DQA2P01906 AL161798.1-201ENST00000604630 131 ntBASIC3.34□□□□□ -1.87
HLA-DQA2P01906 AL110115.1-201ENST00000614396 364 ntBASIC3.34□□□□□ -1.87
HLA-DQA2P01906 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DQA2P01906 DUXAP9-208ENST00000622815 614 ntBASIC3.34□□□□□ -1.87
HLA-DQA2P01906 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DQA2P01906 AC244205.2-202ENST00000635781 342 ntBASIC3.34□□□□□ -1.87
HLA-DQA2P01906 Z99571.1-201ENST00000636677 394 ntBASIC3.34□□□□□ -1.87
HLA-DQA2P01906 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DQA2P01906 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
HLA-DQA2P01906 HSPA8P4-201ENST00000511877 1920 ntBASIC3.34□□□□□ -1.88
HLA-DQA2P01906 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HLA-DQA2P01906 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
HLA-DQA2P01906 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HLA-DQA2P01906 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.34□□□□□ -1.88
HLA-DQA2P01906 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DQA2P01906 AL139276.1-201ENST00000311910 1001 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 Y_RNA.160-201ENST00000363677 92 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DQA2P01906 RNU6-38P-201ENST00000384085 107 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HLA-DQA2P01906 RNA5SP424-201ENST00000390988 115 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 AL356776.1-201ENST00000406574 447 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DQA2P01906 RNA5SP317-201ENST00000410176 116 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 Y_RNA.615-201ENST00000410769 117 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 RNA5SP311-201ENST00000411290 116 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DQA2P01906 C4BPAP2-201ENST00000428434 478 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 AL117339.2-201ENST00000430475 180 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DQA2P01906 RPL36AP53-201ENST00000432891 316 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DQA2P01906 TAAR7P-201ENST00000436141 242 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 HSPD1P21-201ENST00000436541 245 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DQA2P01906 CALM1P1-201ENST00000442082 433 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 H2AFZP6-201ENST00000444403 394 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DQA2P01906 AC009220.1-201ENST00000451614 275 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 RNU6-333P-201ENST00000459117 107 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 AC087588.1-201ENST00000462203 316 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 RPL21P99-201ENST00000480369 423 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DQA2P01906 RN7SKP13-201ENST00000515933 244 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 RNA5SP315-201ENST00000516340 116 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 RNA5SP312-201ENST00000517068 116 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DQA2P01906 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DQA2P01906 AL121579.1-201ENST00000555129 305 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DQA2P01906 MIR4644-201ENST00000579929 84 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
HLA-DQA2P01906 AL138889.2-201ENST00000603883 242 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms