Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.82□□□□□ -1.64
VAMP4O75379 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VAMP4O75379 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.82□□□□□ -1.64
VAMP4O75379 API5P2-201ENST00000397055 1498 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VAMP4O75379 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
VAMP4O75379 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VAMP4O75379 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VAMP4O75379 AL137003.2-201ENST00000606924 2538 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
VAMP4O75379 XIAPP3-201ENST00000312918 795 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 Y_RNA.378-201ENST00000365652 113 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.81□□□□□ -1.64
VAMP4O75379 Y_RNA.422-201ENST00000384054 114 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 RNU6-1297P-201ENST00000384415 104 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 RNU6-738P-201ENST00000384531 106 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 MIR559-201ENST00000385188 96 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 Y_RNA.579-201ENST00000390939 94 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 RN7SKP202-201ENST00000410439 330 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 RNU4-65P-201ENST00000410473 140 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 RNU4-46P-201ENST00000410818 138 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 RAB9AP3-201ENST00000412737 573 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 VN1R36P-201ENST00000414936 291 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 RPL7P46-201ENST00000425129 740 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 RPS3AP52-201ENST00000435639 297 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 RPL23AP33-201ENST00000442301 452 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 RAB9AP1-201ENST00000449393 573 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 AC007967.1-201ENST00000455422 1159 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.81□□□□□ -1.64
VAMP4O75379 SNORD108-201ENST00000459332 71 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 AC020593.1-201ENST00000507399 299 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 RNU6-559P-201ENST00000516151 98 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 Y_RNA.718-201ENST00000517110 102 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.81□□□□□ -1.64
VAMP4O75379 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.81□□□□□ -1.64
VAMP4O75379 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.81□□□□□ -1.64
VAMP4O75379 BNIP3P25-201ENST00000596023 559 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 LLPHP1-201ENST00000603571 367 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 CTHRC1P1-201ENST00000605383 469 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 SNHG22-203ENST00000617833 660 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 MTCO1P24-201ENST00000515438 1558 ntBASIC4.81□□□□□ -1.64
VAMP4O75379 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
VAMP4O75379 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.81□□□□□ -1.64
VAMP4O75379 AC087190.4-201ENST00000574616 8334 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VAMP4O75379 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.8□□□□□ -1.64
VAMP4O75379 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
VAMP4O75379 SNORD113-7-201ENST00000363762 77 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 SNORA4.3-201ENST00000365564 137 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
VAMP4O75379 LAP3P1-201ENST00000403648 294 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 RPL21P24-201ENST00000413752 448 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 RPL17P36-201ENST00000420302 549 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 AC005517.2-201ENST00000424673 553 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.8□□□□□ -1.64
VAMP4O75379 Y_RNA.635-201ENST00000459041 101 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 MTND4P17-201ENST00000470444 350 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 AC012181.1-201ENST00000479895 423 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 RN7SL432P-201ENST00000484057 298 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 AC083904.1-201ENST00000487828 231 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 UBE2CP3-201ENST00000502715 450 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.8□□□□□ -1.64
VAMP4O75379 CCDC34P1-201ENST00000507441 517 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 AC104806.1-201ENST00000508720 308 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 AC098591.2-201ENST00000510152 315 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 RN7SKP234-201ENST00000517173 224 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.8□□□□□ -1.64
VAMP4O75379 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.8□□□□□ -1.64
VAMP4O75379 AP000889.2-201ENST00000532684 490 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 MIR3171-201ENST00000584270 74 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 AL669831.4-202ENST00000590817 238 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 AL670379.6-201ENST00000603753 252 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 AL670379.11-201ENST00000604059 253 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 AP001330.4-201ENST00000604350 154 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 AC008162.1-201ENST00000604718 254 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 AL670379.1-201ENST00000604752 252 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 AP000942.4-201ENST00000604811 241 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 AL670379.5-201ENST00000605253 252 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 AL670379.12-201ENST00000605291 253 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 AL670379.8-201ENST00000605353 252 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 BRDTP1-201ENST00000605735 677 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 AL670379.7-201ENST00000605823 252 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
VAMP4O75379 MIR6130-201ENST00000619419 109 ntBASIC4.8□□□□□ -1.64
VAMP4O75379 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.8□□□□□ -1.64
VAMP4O75379 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VAMP4O75379 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VAMP4O75379 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VAMP4O75379 TPTE2P4-201ENST00000258589 1605 ntBASIC4.79□□□□□ -1.64
VAMP4O75379 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
VAMP4O75379 RNU6-1287P-201ENST00000362914 107 ntBASIC4.79□□□□□ -1.64
VAMP4O75379 Y_RNA.212-201ENST00000364177 102 ntBASIC4.79□□□□□ -1.64
VAMP4O75379 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.79□□□□□ -1.64
VAMP4O75379 Y_RNA.493-201ENST00000384422 102 ntBASIC4.79□□□□□ -1.64
VAMP4O75379 SNORD3H-201ENST00000384486 214 ntBASIC4.79□□□□□ -1.64
VAMP4O75379 SNORD116-29-201ENST00000384516 83 ntBASIC4.79□□□□□ -1.64
VAMP4O75379 RNU6-1060P-201ENST00000384664 107 ntBASIC4.79□□□□□ -1.64
VAMP4O75379 RNA5SP424-201ENST00000390988 115 ntBASIC4.79□□□□□ -1.64
VAMP4O75379 MIR548K-201ENST00000408406 116 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms