Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.86□□□□□ -1.47
RNF40O75150 AC024067.1-201ENST00000426199 223 ntBASIC5.86□□□□□ -1.47
RNF40O75150 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.86□□□□□ -1.47
RNF40O75150 AC005532.2-201ENST00000467154 373 ntBASIC5.86□□□□□ -1.47
RNF40O75150 AC117440.1-201ENST00000474107 571 ntBASIC5.86□□□□□ -1.47
RNF40O75150 RN7SL727P-201ENST00000482164 296 ntBASIC5.86□□□□□ -1.47
RNF40O75150 AC093270.2-201ENST00000486157 792 ntBASIC5.86□□□□□ -1.47
RNF40O75150 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.86□□□□□ -1.47
RNF40O75150 RNU4ATAC15P-201ENST00000516415 126 ntBASIC5.86□□□□□ -1.47
RNF40O75150 Y_RNA.686-201ENST00000516548 134 ntBASIC5.86□□□□□ -1.47
RNF40O75150 RNU6-567P-201ENST00000516746 107 ntBASIC5.86□□□□□ -1.47
RNF40O75150 RNU6-840P-201ENST00000517275 65 ntBASIC5.86□□□□□ -1.47
RNF40O75150 CYCSP26-201ENST00000534107 320 ntBASIC5.86□□□□□ -1.47
RNF40O75150 TGIF1P1-201ENST00000558095 802 ntBASIC5.86□□□□□ -1.47
RNF40O75150 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.86□□□□□ -1.47
RNF40O75150 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.86□□□□□ -1.47
RNF40O75150 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.86□□□□□ -1.47
RNF40O75150 AC123786.2-201ENST00000603459 275 ntBASIC5.86□□□□□ -1.47
RNF40O75150 AC118658.2-201ENST00000618697 459 ntBASIC5.86□□□□□ -1.47
RNF40O75150 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
RNF40O75150 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.86□□□□□ -1.47
RNF40O75150 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
RNF40O75150 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.86□□□□□ -1.47
RNF40O75150 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RNF40O75150 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
RNF40O75150 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.86□□□□□ -1.47
RNF40O75150 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.86□□□□□ -1.47
RNF40O75150 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RNF40O75150 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.85□□□□□ -1.47
RNF40O75150 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RNF40O75150 LINC01109-201ENST00000603837 3081 ntBASIC5.85□□□□□ -1.47
RNF40O75150 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
RNF40O75150 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
RNF40O75150 SAMMSON-226ENST00000642089 1582 ntBASIC5.85□□□□□ -1.47
RNF40O75150 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.85□□□□□ -1.47
RNF40O75150 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RNF40O75150 Y_RNA.7-201ENST00000362352 102 ntBASIC5.85□□□□□ -1.47
RNF40O75150 RNU5A-1-201ENST00000362698 116 ntBASIC5.85□□□□□ -1.47
RNF40O75150 RNA5SP131-201ENST00000365452 119 ntBASIC5.85□□□□□ -1.47
RNF40O75150 AC009804.1-201ENST00000400949 179 ntBASIC5.85□□□□□ -1.47
RNF40O75150 RPS4XP22-201ENST00000480755 780 ntBASIC5.85□□□□□ -1.47
RNF40O75150 RNU6-513P-201ENST00000516104 104 ntBASIC5.85□□□□□ -1.47
RNF40O75150 RNU7-121P-201ENST00000516604 62 ntBASIC5.85□□□□□ -1.47
RNF40O75150 AL139395.1-201ENST00000603662 160 ntBASIC5.85□□□□□ -1.47
RNF40O75150 MIR6837-201ENST00000620884 64 ntBASIC5.85□□□□□ -1.47
RNF40O75150 AC090617.7-201ENST00000623952 126 ntBASIC5.85□□□□□ -1.47
RNF40O75150 AC008873.1-201ENST00000625051 138 ntBASIC5.85□□□□□ -1.47
RNF40O75150 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RNF40O75150 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RNF40O75150 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RNF40O75150 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RNF40O75150 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
RNF40O75150 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.84□□□□□ -1.47
RNF40O75150 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RNF40O75150 OR4F13P-202ENST00000560066 2054 ntBASIC5.84□□□□□ -1.47
RNF40O75150 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.84□□□□□ -1.47
RNF40O75150 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
RNF40O75150 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
RNF40O75150 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
RNF40O75150 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
RNF40O75150 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
RNF40O75150 RNA5SP319-201ENST00000362768 119 ntBASIC5.84□□□□□ -1.47
RNF40O75150 RNA5SP234-201ENST00000363916 119 ntBASIC5.84□□□□□ -1.47
RNF40O75150 Y_RNA.238-201ENST00000364441 102 ntBASIC5.84□□□□□ -1.47
RNF40O75150 MIR301A-201ENST00000385261 86 ntBASIC5.84□□□□□ -1.47
RNF40O75150 AC005042.1-201ENST00000393397 800 ntBASIC5.84□□□□□ -1.47
RNF40O75150 RPL7AP73-201ENST00000413490 353 ntBASIC5.84□□□□□ -1.47
RNF40O75150 AL390729.2-201ENST00000416137 156 ntBASIC5.84□□□□□ -1.47
RNF40O75150 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.84□□□□□ -1.47
RNF40O75150 AL512844.2-201ENST00000433990 593 ntBASIC5.84□□□□□ -1.47
RNF40O75150 RPL23AP3-201ENST00000453844 468 ntBASIC5.84□□□□□ -1.47
RNF40O75150 AC087588.1-201ENST00000462203 316 ntBASIC5.84□□□□□ -1.47
RNF40O75150 RN7SL583P-201ENST00000475692 287 ntBASIC5.84□□□□□ -1.47
RNF40O75150 AC008953.1-201ENST00000497334 318 ntBASIC5.84□□□□□ -1.47
RNF40O75150 AC098976.1-201ENST00000513014 541 ntBASIC5.84□□□□□ -1.47
RNF40O75150 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.84□□□□□ -1.47
RNF40O75150 AC024940.3-201ENST00000538551 316 ntBASIC5.84□□□□□ -1.47
RNF40O75150 MIR4782-201ENST00000577987 79 ntBASIC5.84□□□□□ -1.47
RNF40O75150 MIR4472-2-201ENST00000582069 67 ntBASIC5.84□□□□□ -1.47
RNF40O75150 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
RNF40O75150 AC008121.1-201ENST00000603244 268 ntBASIC5.84□□□□□ -1.47
RNF40O75150 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RNF40O75150 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC5.84□□□□□ -1.47
RNF40O75150 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
RNF40O75150 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
RNF40O75150 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
RNF40O75150 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.84□□□□□ -1.47
RNF40O75150 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
RNF40O75150 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
RNF40O75150 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RNF40O75150 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
RNF40O75150 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.83□□□□□ -1.48
RNF40O75150 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.83□□□□□ -1.48
RNF40O75150 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
RNF40O75150 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.83□□□□□ -1.48
RNF40O75150 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.83□□□□□ -1.48
RNF40O75150 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
RNF40O75150 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RNF40O75150 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RNF40O75150 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms