Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AL358934.1-201ENST00000432346 324 ntBASIC3.09□□□□□ -1.91
SSX4O60224 MTCO3P5-201ENST00000433620 714 ntBASIC3.09□□□□□ -1.91
SSX4O60224 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.09□□□□□ -1.91
SSX4O60224 AC009969.1-201ENST00000438726 172 ntBASIC3.09□□□□□ -1.91
SSX4O60224 HMGB3P12-201ENST00000438745 556 ntBASIC3.09□□□□□ -1.91
SSX4O60224 PIGFP3-201ENST00000441918 722 ntBASIC3.09□□□□□ -1.91
SSX4O60224 AL590664.1-201ENST00000448065 339 ntBASIC3.09□□□□□ -1.91
SSX4O60224 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.09□□□□□ -1.91
SSX4O60224 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.09□□□□□ -1.91
SSX4O60224 AC023598.1-201ENST00000472521 361 ntBASIC3.09□□□□□ -1.91
SSX4O60224 KC877373.1-201ENST00000479066 408 ntBASIC3.09□□□□□ -1.91
SSX4O60224 AL135752.1-201ENST00000479477 471 ntBASIC3.09□□□□□ -1.91
SSX4O60224 KCTD9P5-201ENST00000504141 1170 ntBASIC3.09□□□□□ -1.91
SSX4O60224 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SSX4O60224 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
SSX4O60224 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SSX4O60224 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.09□□□□□ -1.91
SSX4O60224 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.09□□□□□ -1.91
SSX4O60224 AC011611.1-201ENST00000552179 197 ntBASIC3.09□□□□□ -1.91
SSX4O60224 TRAV28-201ENST00000557548 323 ntBASIC3.09□□□□□ -1.91
SSX4O60224 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.09□□□□□ -1.91
SSX4O60224 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.09□□□□□ -1.91
SSX4O60224 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.09□□□□□ -1.91
SSX4O60224 AC067852.3-201ENST00000589177 561 ntBASIC3.09□□□□□ -1.91
SSX4O60224 AC091805.2-201ENST00000603848 235 ntBASIC3.09□□□□□ -1.91
SSX4O60224 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.09□□□□□ -1.91
SSX4O60224 AC007619.2-201ENST00000605743 379 ntBASIC3.09□□□□□ -1.91
SSX4O60224 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.09□□□□□ -1.91
SSX4O60224 AC068880.5-201ENST00000624331 290 ntBASIC3.09□□□□□ -1.91
SSX4O60224 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.09□□□□□ -1.91
SSX4O60224 MTND1P37-201ENST00000636562 264 ntBASIC3.09□□□□□ -1.91
SSX4O60224 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SSX4O60224 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.08□□□□□ -1.92
SSX4O60224 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SSX4O60224 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SSX4O60224 TPTE2P4-201ENST00000258589 1605 ntBASIC3.08□□□□□ -1.92
SSX4O60224 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.08□□□□□ -1.92
SSX4O60224 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.08□□□□□ -1.92
SSX4O60224 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
SSX4O60224 RPL7P26-201ENST00000333817 754 ntBASIC3.08□□□□□ -1.92
SSX4O60224 RNU6-14P-201ENST00000384630 106 ntBASIC3.08□□□□□ -1.92
SSX4O60224 MIR558-201ENST00000384920 94 ntBASIC3.08□□□□□ -1.92
SSX4O60224 AL139397.2-201ENST00000404529 772 ntBASIC3.08□□□□□ -1.92
SSX4O60224 RNU2-33P-201ENST00000410344 192 ntBASIC3.08□□□□□ -1.92
SSX4O60224 RNU2-16P-201ENST00000410712 136 ntBASIC3.08□□□□□ -1.92
SSX4O60224 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.08□□□□□ -1.92
SSX4O60224 BTF3L4P3-201ENST00000418879 476 ntBASIC3.08□□□□□ -1.92
SSX4O60224 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.08□□□□□ -1.92
SSX4O60224 AC097713.2-201ENST00000430199 356 ntBASIC3.08□□□□□ -1.92
SSX4O60224 RPL23AP69-201ENST00000431134 458 ntBASIC3.08□□□□□ -1.92
SSX4O60224 AL512844.2-201ENST00000433990 593 ntBASIC3.08□□□□□ -1.92
SSX4O60224 NEFMP1-201ENST00000443423 1006 ntBASIC3.08□□□□□ -1.92
SSX4O60224 MTCYBP1-201ENST00000454315 1119 ntBASIC3.08□□□□□ -1.92
SSX4O60224 BX510359.1-201ENST00000456973 237 ntBASIC3.08□□□□□ -1.92
SSX4O60224 AC013267.1-201ENST00000458227 267 ntBASIC3.08□□□□□ -1.92
SSX4O60224 RPL7P5-201ENST00000471472 736 ntBASIC3.08□□□□□ -1.92
SSX4O60224 RPL30P14-201ENST00000482744 348 ntBASIC3.08□□□□□ -1.92
SSX4O60224 AC093663.1-201ENST00000497190 394 ntBASIC3.08□□□□□ -1.92
SSX4O60224 AC105252.1-201ENST00000503089 286 ntBASIC3.08□□□□□ -1.92
SSX4O60224 HSPD1P15-201ENST00000505573 1122 ntBASIC3.08□□□□□ -1.92
SSX4O60224 AC006445.2-201ENST00000510061 472 ntBASIC3.08□□□□□ -1.92
SSX4O60224 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.08□□□□□ -1.92
SSX4O60224 SNORA31.3-201ENST00000516029 96 ntBASIC3.08□□□□□ -1.92
SSX4O60224 SCARNA24.1-201ENST00000516465 137 ntBASIC3.08□□□□□ -1.92
SSX4O60224 SCARNA20.6-201ENST00000517251 106 ntBASIC3.08□□□□□ -1.92
SSX4O60224 AC090572.1-201ENST00000519251 160 ntBASIC3.08□□□□□ -1.92
SSX4O60224 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.08□□□□□ -1.92
SSX4O60224 AP003392.2-201ENST00000527269 208 ntBASIC3.08□□□□□ -1.92
SSX4O60224 AC103843.2-201ENST00000530523 682 ntBASIC3.08□□□□□ -1.92
SSX4O60224 AC007458.1-201ENST00000542812 373 ntBASIC3.08□□□□□ -1.92
SSX4O60224 NCAPGP2-201ENST00000557911 754 ntBASIC3.08□□□□□ -1.92
SSX4O60224 RPL21P12-201ENST00000559810 515 ntBASIC3.08□□□□□ -1.92
SSX4O60224 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.08□□□□□ -1.92
SSX4O60224 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.08□□□□□ -1.92
SSX4O60224 AL391840.1-201ENST00000571144 367 ntBASIC3.08□□□□□ -1.92
SSX4O60224 HSPE1P7-201ENST00000604681 321 ntBASIC3.08□□□□□ -1.92
SSX4O60224 AC007363.1-201ENST00000604736 620 ntBASIC3.08□□□□□ -1.92
SSX4O60224 MIR7851-201ENST00000610611 160 ntBASIC3.08□□□□□ -1.92
SSX4O60224 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.08□□□□□ -1.92
SSX4O60224 HULC.1-201ENST00000612720 240 ntBASIC3.08□□□□□ -1.92
SSX4O60224 AC139792.2-201ENST00000624218 587 ntBASIC3.08□□□□□ -1.92
SSX4O60224 LRRC77P-213ENST00000637727 880 ntBASIC3.08□□□□□ -1.92
SSX4O60224 AP000553.6-201ENST00000641242 118 ntBASIC3.08□□□□□ -1.92
SSX4O60224 AL049641.1-201ENST00000441055 1948 ntBASIC3.08□□□□□ -1.92
SSX4O60224 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.08□□□□□ -1.92
SSX4O60224 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.08□□□□□ -1.92
SSX4O60224 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SSX4O60224 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SSX4O60224 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SSX4O60224 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SSX4O60224 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SSX4O60224 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
SSX4O60224 RNU6-960P-201ENST00000364056 120 ntBASIC3.07□□□□□ -1.92
SSX4O60224 RNA5SP267-201ENST00000364893 126 ntBASIC3.07□□□□□ -1.92
SSX4O60224 RNU6-282P-201ENST00000365357 103 ntBASIC3.07□□□□□ -1.92
SSX4O60224 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.07□□□□□ -1.92
SSX4O60224 RNU6-1042P-201ENST00000384204 107 ntBASIC3.07□□□□□ -1.92
SSX4O60224 RNU2-66P-201ENST00000410650 161 ntBASIC3.07□□□□□ -1.92
SSX4O60224 RNA5SP38-201ENST00000410750 119 ntBASIC3.07□□□□□ -1.92
SSX4O60224 MTCO3P41-201ENST00000414801 328 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms