Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
RNF223E7ERA6 SNORA64.1-201ENST00000362600 132 ntBASIC4.96□□□□□ -1.62
RNF223E7ERA6 SNORD56.1-201ENST00000362913 68 ntBASIC4.96□□□□□ -1.62
RNF223E7ERA6 RNU6-1107P-201ENST00000364817 104 ntBASIC4.96□□□□□ -1.62
RNF223E7ERA6 RNU6-1336P-201ENST00000383886 109 ntBASIC4.96□□□□□ -1.62
RNF223E7ERA6 SNORA70-201ENST00000384436 135 ntBASIC4.96□□□□□ -1.62
RNF223E7ERA6 SNORA70E-201ENST00000384492 135 ntBASIC4.96□□□□□ -1.62
RNF223E7ERA6 SNORA79-201ENST00000408376 140 ntBASIC4.96□□□□□ -1.62
RNF223E7ERA6 RNU6-855P-201ENST00000410395 104 ntBASIC4.96□□□□□ -1.62
RNF223E7ERA6 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.96□□□□□ -1.62
RNF223E7ERA6 AC012306.1-201ENST00000423267 114 ntBASIC4.96□□□□□ -1.62
RNF223E7ERA6 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC4.96□□□□□ -1.62
RNF223E7ERA6 AL451050.1-201ENST00000450126 415 ntBASIC4.96□□□□□ -1.62
RNF223E7ERA6 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.96□□□□□ -1.62
RNF223E7ERA6 SNORA40.13-201ENST00000516379 120 ntBASIC4.96□□□□□ -1.62
RNF223E7ERA6 AC093331.1-201ENST00000521474 169 ntBASIC4.96□□□□□ -1.62
RNF223E7ERA6 AC018630.3-201ENST00000542637 96 ntBASIC4.96□□□□□ -1.62
RNF223E7ERA6 AC073916.1-201ENST00000545095 130 ntBASIC4.96□□□□□ -1.62
RNF223E7ERA6 AL049872.1-201ENST00000556323 322 ntBASIC4.96□□□□□ -1.62
RNF223E7ERA6 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC4.96□□□□□ -1.62
RNF223E7ERA6 MIR4716-201ENST00000579628 84 ntBASIC4.96□□□□□ -1.62
RNF223E7ERA6 MIR4512-201ENST00000583257 77 ntBASIC4.96□□□□□ -1.62
RNF223E7ERA6 AL031274.2-201ENST00000599419 203 ntBASIC4.96□□□□□ -1.62
RNF223E7ERA6 AL356575.1-201ENST00000603008 283 ntBASIC4.96□□□□□ -1.62
RNF223E7ERA6 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.96□□□□□ -1.62
RNF223E7ERA6 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.96□□□□□ -1.62
RNF223E7ERA6 Xist_exon4.1-201ENST00000615964 126 ntBASIC4.96□□□□□ -1.62
RNF223E7ERA6 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF223E7ERA6 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
RNF223E7ERA6 AL450326.2-201ENST00000421913 1962 ntBASIC4.96□□□□□ -1.62
RNF223E7ERA6 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF223E7ERA6 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC4.96□□□□□ -1.62
RNF223E7ERA6 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
RNF223E7ERA6 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF223E7ERA6 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC4.96□□□□□ -1.62
RNF223E7ERA6 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNF223E7ERA6 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC4.95□□□□□ -1.62
RNF223E7ERA6 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC4.95□□□□□ -1.62
RNF223E7ERA6 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
RNF223E7ERA6 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
RNF223E7ERA6 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF223E7ERA6 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF223E7ERA6 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF223E7ERA6 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
RNF223E7ERA6 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.95□□□□□ -1.62
RNF223E7ERA6 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.95□□□□□ -1.62
RNF223E7ERA6 RNA5SP333-201ENST00000363466 118 ntBASIC4.95□□□□□ -1.62
RNF223E7ERA6 RNU6-799P-201ENST00000363567 107 ntBASIC4.95□□□□□ -1.62
RNF223E7ERA6 SNORD45.3-201ENST00000363836 72 ntBASIC4.95□□□□□ -1.62
RNF223E7ERA6 RNA5SP334-201ENST00000364825 118 ntBASIC4.95□□□□□ -1.62
RNF223E7ERA6 Y_RNA.310-201ENST00000365063 113 ntBASIC4.95□□□□□ -1.62
RNF223E7ERA6 MIR544A-201ENST00000384855 91 ntBASIC4.95□□□□□ -1.62
RNF223E7ERA6 AL078599.1-201ENST00000402075 293 ntBASIC4.95□□□□□ -1.62
RNF223E7ERA6 MRPL53P1-201ENST00000414323 319 ntBASIC4.95□□□□□ -1.62
RNF223E7ERA6 AC245028.1-201ENST00000423259 256 ntBASIC4.95□□□□□ -1.62
RNF223E7ERA6 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC4.95□□□□□ -1.62
RNF223E7ERA6 RN7SKP12-201ENST00000516275 143 ntBASIC4.95□□□□□ -1.62
RNF223E7ERA6 RNU6-65P-201ENST00000516332 98 ntBASIC4.95□□□□□ -1.62
RNF223E7ERA6 IGHV1-14-201ENST00000523391 241 ntBASIC4.95□□□□□ -1.62
RNF223E7ERA6 LINC00933-203ENST00000559812 219 ntBASIC4.95□□□□□ -1.62
RNF223E7ERA6 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.95□□□□□ -1.62
RNF223E7ERA6 RPL30P11-203ENST00000598995 310 ntBASIC4.95□□□□□ -1.62
RNF223E7ERA6 AL359198.2-201ENST00000611836 194 ntBASIC4.95□□□□□ -1.62
RNF223E7ERA6 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
RNF223E7ERA6 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNF223E7ERA6 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF223E7ERA6 AC073136.1-201ENST00000449426 2884 ntBASIC4.95□□□□□ -1.62
RNF223E7ERA6 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC4.95□□□□□ -1.62
RNF223E7ERA6 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNF223E7ERA6 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.95□□□□□ -1.62
RNF223E7ERA6 AP000547.3-204ENST00000588548 2523 ntBASIC4.95□□□□□ -1.62
RNF223E7ERA6 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF223E7ERA6 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
RNF223E7ERA6 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNF223E7ERA6 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.95□□□□□ -1.62
RNF223E7ERA6 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF223E7ERA6 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNF223E7ERA6 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF223E7ERA6 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF223E7ERA6 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
RNF223E7ERA6 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC4.94□□□□□ -1.62
RNF223E7ERA6 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF223E7ERA6 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC4.94□□□□□ -1.62
RNF223E7ERA6 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNF223E7ERA6 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF223E7ERA6 RNA5SP514-201ENST00000363717 111 ntBASIC4.94□□□□□ -1.62
RNF223E7ERA6 RNU6-171P-201ENST00000384354 107 ntBASIC4.94□□□□□ -1.62
RNF223E7ERA6 AL603914.1-201ENST00000401964 204 ntBASIC4.94□□□□□ -1.62
RNF223E7ERA6 AL357515.1-201ENST00000402967 542 ntBASIC4.94□□□□□ -1.62
RNF223E7ERA6 BMS1P17-202ENST00000416720 316 ntBASIC4.94□□□□□ -1.62
RNF223E7ERA6 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC4.94□□□□□ -1.62
RNF223E7ERA6 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF223E7ERA6 RPS27P18-201ENST00000431701 247 ntBASIC4.94□□□□□ -1.62
RNF223E7ERA6 HMGB1P37-201ENST00000439613 609 ntBASIC4.94□□□□□ -1.62
RNF223E7ERA6 RPS11P7-201ENST00000442125 465 ntBASIC4.94□□□□□ -1.62
RNF223E7ERA6 AC009237.8-201ENST00000445492 379 ntBASIC4.94□□□□□ -1.62
RNF223E7ERA6 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF223E7ERA6 RN7SL72P-201ENST00000460697 269 ntBASIC4.94□□□□□ -1.62
RNF223E7ERA6 RPS23P6-201ENST00000466136 431 ntBASIC4.94□□□□□ -1.62
RNF223E7ERA6 RPL23AP14-201ENST00000468281 468 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms