Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 RNU6-1249P-201ENST00000363237 111 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 Y_RNA.153-201ENST00000363615 91 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 Y_RNA.188-201ENST00000363952 111 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 SET-203ENST00000372688 801 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 Y_RNA.428-201ENST00000384078 102 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 RNU6-45P-201ENST00000384471 107 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 RNU6-306P-201ENST00000384617 107 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 Y_RNA.574-201ENST00000384766 95 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 RNU2-43P-201ENST00000410306 190 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 RNU6-712P-201ENST00000410558 100 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 RN7SKP216-201ENST00000411050 312 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 AC011933.1-201ENST00000413334 321 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 RBMY1KP-201ENST00000423480 476 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 AL138785.1-201ENST00000425821 331 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 USP9YP30-201ENST00000430729 455 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 NOTCH2P1-201ENST00000443481 624 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 AL590399.6-201ENST00000446396 307 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 RN7SL481P-201ENST00000477764 299 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 RPS27AP13-201ENST00000498403 237 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 AC022493.2-201ENST00000506122 481 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 SCARNA16.2-201ENST00000516520 172 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 RNA5SP384-201ENST00000516615 116 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 RNA5SP73-201ENST00000516744 108 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 RN7SKP258-201ENST00000517151 304 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 SNORD116.3-201ENST00000517176 78 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 IGLV3-26-201ENST00000520756 302 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 GNAI2P1-201ENST00000541815 315 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 AC012119.1-201ENST00000603184 222 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 CDC27P3-201ENST00000635418 1910 ntBASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDHA4Q9UN74 AC005592.1-201ENST00000566527 1640 ntBASIC4.9□□□□□ -1.62
PCDHA4Q9UN74 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
PCDHA4Q9UN74 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
PCDHA4Q9UN74 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PCDHA4Q9UN74 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.62
PCDHA4Q9UN74 AC126755.2-208ENST00000327792 462 ntBASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 AC138969.1-213ENST00000331436 462 ntBASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 RNU1-14P-201ENST00000362759 152 ntBASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 RNU6-817P-201ENST00000391083 104 ntBASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 AL590704.1-201ENST00000402856 794 ntBASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 RNA5SP36-201ENST00000410197 133 ntBASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 RN7SKP58-201ENST00000411010 305 ntBASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 AC084198.1-201ENST00000477747 402 ntBASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 RN7SL283P-201ENST00000489055 303 ntBASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 AC108145.1-201ENST00000503770 153 ntBASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 AL592156.1-201ENST00000508758 304 ntBASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 AC008958.1-201ENST00000511047 682 ntBASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 SNORA31.3-201ENST00000516029 96 ntBASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 RNA5SP49-201ENST00000516450 115 ntBASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 AC011373.1-201ENST00000607270 237 ntBASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 FAM27D1-201ENST00000612308 341 ntBASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 SDR42E1P2-201ENST00000614861 481 ntBASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 AC114781.5-201ENST00000615297 108 ntBASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PCDHA4Q9UN74 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHA4Q9UN74 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PCDHA4Q9UN74 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHA4Q9UN74 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHA4Q9UN74 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
PCDHA4Q9UN74 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHA4Q9UN74 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
PCDHA4Q9UN74 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDHA4Q9UN74 RNA5SP366-201ENST00000365454 123 ntBASIC4.89□□□□□ -1.63
PCDHA4Q9UN74 RNU6-26P-201ENST00000383985 107 ntBASIC4.89□□□□□ -1.63
PCDHA4Q9UN74 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHA4Q9UN74 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.89□□□□□ -1.63
PCDHA4Q9UN74 RNU6-293P-201ENST00000411259 106 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms