Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS45Q9NRW7 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS45Q9NRW7 SCARNA15.2-201ENST00000516409 127 ntBASIC3.88□□□□□ -1.79
VPS45Q9NRW7 Y_RNA.704-201ENST00000516851 102 ntBASIC3.88□□□□□ -1.79
VPS45Q9NRW7 RNU6-1220P-201ENST00000517126 108 ntBASIC3.88□□□□□ -1.79
VPS45Q9NRW7 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS45Q9NRW7 AP001804.3-201ENST00000525146 880 ntBASIC3.88□□□□□ -1.79
VPS45Q9NRW7 AC118273.2-201ENST00000532092 465 ntBASIC3.88□□□□□ -1.79
VPS45Q9NRW7 MIR548S-201ENST00000581352 82 ntBASIC3.88□□□□□ -1.79
VPS45Q9NRW7 AC002553.4-201ENST00000616896 331 ntBASIC3.88□□□□□ -1.79
VPS45Q9NRW7 AC005609.4-201ENST00000625071 447 ntBASIC3.88□□□□□ -1.79
VPS45Q9NRW7 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS45Q9NRW7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
VPS45Q9NRW7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS45Q9NRW7 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS45Q9NRW7 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS45Q9NRW7 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS45Q9NRW7 RNU5A-1-201ENST00000362698 116 ntBASIC3.87□□□□□ -1.79
VPS45Q9NRW7 RNU6-1090P-201ENST00000364065 94 ntBASIC3.87□□□□□ -1.79
VPS45Q9NRW7 RNU6-1322P-201ENST00000364309 107 ntBASIC3.87□□□□□ -1.79
VPS45Q9NRW7 U3.11-201ENST00000364476 212 ntBASIC3.87□□□□□ -1.79
VPS45Q9NRW7 RNU6-483P-201ENST00000384088 108 ntBASIC3.87□□□□□ -1.79
VPS45Q9NRW7 U1.1-201ENST00000384101 164 ntBASIC3.87□□□□□ -1.79
VPS45Q9NRW7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS45Q9NRW7 RPS4XP8-201ENST00000402039 771 ntBASIC3.87□□□□□ -1.79
VPS45Q9NRW7 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS45Q9NRW7 AL353193.1-201ENST00000421444 268 ntBASIC3.87□□□□□ -1.79
VPS45Q9NRW7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.87□□□□□ -1.79
VPS45Q9NRW7 MTCO3P18-201ENST00000440206 761 ntBASIC3.87□□□□□ -1.79
VPS45Q9NRW7 MTCO3P45-201ENST00000443036 613 ntBASIC3.87□□□□□ -1.79
VPS45Q9NRW7 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.87□□□□□ -1.79
VPS45Q9NRW7 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.87□□□□□ -1.79
VPS45Q9NRW7 RPS23P3-201ENST00000470993 430 ntBASIC3.87□□□□□ -1.79
VPS45Q9NRW7 AC078785.3-201ENST00000476607 425 ntBASIC3.87□□□□□ -1.79
VPS45Q9NRW7 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS45Q9NRW7 RNU6-410P-201ENST00000517006 107 ntBASIC3.87□□□□□ -1.79
VPS45Q9NRW7 RNU6-1231P-201ENST00000517185 103 ntBASIC3.87□□□□□ -1.79
VPS45Q9NRW7 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS45Q9NRW7 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS45Q9NRW7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.87□□□□□ -1.79
VPS45Q9NRW7 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS45Q9NRW7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS45Q9NRW7 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS45Q9NRW7 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS45Q9NRW7 MIR5187-201ENST00000583479 76 ntBASIC3.87□□□□□ -1.79
VPS45Q9NRW7 AC098848.2-201ENST00000588023 330 ntBASIC3.87□□□□□ -1.79
VPS45Q9NRW7 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS45Q9NRW7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.87□□□□□ -1.79
VPS45Q9NRW7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS45Q9NRW7 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS45Q9NRW7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
VPS45Q9NRW7 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS45Q9NRW7 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS45Q9NRW7 CR848007.1-201ENST00000442354 1699 ntBASIC3.87□□□□□ -1.79
VPS45Q9NRW7 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
VPS45Q9NRW7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 Y_RNA.89-201ENST00000363031 102 ntBASIC3.86□□□□□ -1.79
VPS45Q9NRW7 SNORD56.2-201ENST00000363242 71 ntBASIC3.86□□□□□ -1.79
VPS45Q9NRW7 SNORA23-201ENST00000365128 182 ntBASIC3.86□□□□□ -1.79
VPS45Q9NRW7 RNY3P14-201ENST00000384309 102 ntBASIC3.86□□□□□ -1.79
VPS45Q9NRW7 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 YPEL5P1-201ENST00000419731 367 ntBASIC3.86□□□□□ -1.79
VPS45Q9NRW7 AL158156.1-201ENST00000422509 473 ntBASIC3.86□□□□□ -1.79
VPS45Q9NRW7 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 SNRPEP4-201ENST00000435815 279 ntBASIC3.86□□□□□ -1.79
VPS45Q9NRW7 HMGB3P12-201ENST00000438745 556 ntBASIC3.86□□□□□ -1.79
VPS45Q9NRW7 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 AC006480.1-201ENST00000449887 378 ntBASIC3.86□□□□□ -1.79
VPS45Q9NRW7 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 RPS29P2-201ENST00000479278 136 ntBASIC3.86□□□□□ -1.79
VPS45Q9NRW7 RN7SKP209-201ENST00000516888 304 ntBASIC3.86□□□□□ -1.79
VPS45Q9NRW7 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 AC104383.1-201ENST00000530297 370 ntBASIC3.86□□□□□ -1.79
VPS45Q9NRW7 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 MIR3922-201ENST00000585192 84 ntBASIC3.86□□□□□ -1.79
VPS45Q9NRW7 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 AC007621.1-201ENST00000604544 437 ntBASIC3.86□□□□□ -1.79
VPS45Q9NRW7 Z84480.1-201ENST00000605131 311 ntBASIC3.86□□□□□ -1.79
VPS45Q9NRW7 AC103710.3-201ENST00000608157 948 ntBASIC3.86□□□□□ -1.79
VPS45Q9NRW7 AP001596.2-201ENST00000608410 312 ntBASIC3.86□□□□□ -1.79
VPS45Q9NRW7 AC103710.2-201ENST00000609912 942 ntBASIC3.86□□□□□ -1.79
VPS45Q9NRW7 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 AC079684.1-201ENST00000621405 437 ntBASIC3.86□□□□□ -1.79
VPS45Q9NRW7 AF117829.1-206ENST00000621883 3802 ntBASIC3.86□□□□□ -1.79
VPS45Q9NRW7 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS45Q9NRW7 AC099654.14-201ENST00000638599 341 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms