Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.61□□□□□ -1.83
MEIS3Q99687 AC005297.2-201ENST00000450430 606 ntBASIC3.61□□□□□ -1.83
MEIS3Q99687 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.61□□□□□ -1.83
MEIS3Q99687 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.61□□□□□ -1.83
MEIS3Q99687 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.61□□□□□ -1.83
MEIS3Q99687 AC024589.1-201ENST00000512207 263 ntBASIC3.61□□□□□ -1.83
MEIS3Q99687 RNU6-488P-201ENST00000515918 99 ntBASIC3.61□□□□□ -1.83
MEIS3Q99687 SNORD116-26-201ENST00000516006 96 ntBASIC3.61□□□□□ -1.83
MEIS3Q99687 RNU6-1281P-201ENST00000516223 105 ntBASIC3.61□□□□□ -1.83
MEIS3Q99687 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.61□□□□□ -1.83
MEIS3Q99687 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.61□□□□□ -1.83
MEIS3Q99687 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.61□□□□□ -1.83
MEIS3Q99687 AC123904.2-201ENST00000548059 300 ntBASIC3.61□□□□□ -1.83
MEIS3Q99687 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.61□□□□□ -1.83
MEIS3Q99687 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.61□□□□□ -1.83
MEIS3Q99687 AL845331.3-202ENST00000562856 261 ntBASIC3.61□□□□□ -1.83
MEIS3Q99687 BBIP1P1-201ENST00000602999 279 ntBASIC3.61□□□□□ -1.83
MEIS3Q99687 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.61□□□□□ -1.83
MEIS3Q99687 AL161734.1-201ENST00000609720 557 ntBASIC3.61□□□□□ -1.83
MEIS3Q99687 AC135507.2-201ENST00000612443 309 ntBASIC3.61□□□□□ -1.83
MEIS3Q99687 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.61□□□□□ -1.83
MEIS3Q99687 CR392039.4-201ENST00000624968 501 ntBASIC3.61□□□□□ -1.83
MEIS3Q99687 NUP58P1-201ENST00000502546 1738 ntBASIC3.61□□□□□ -1.83
MEIS3Q99687 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.6□□□□□ -1.83
MEIS3Q99687 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
MEIS3Q99687 RNU6-1103P-201ENST00000384150 107 ntBASIC3.6□□□□□ -1.83
MEIS3Q99687 RNU6-441P-201ENST00000384545 106 ntBASIC3.6□□□□□ -1.83
MEIS3Q99687 Y_RNA.535-201ENST00000384612 99 ntBASIC3.6□□□□□ -1.83
MEIS3Q99687 Y_RNA.573-201ENST00000384763 105 ntBASIC3.6□□□□□ -1.83
MEIS3Q99687 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.6□□□□□ -1.83
MEIS3Q99687 RN7SKP266-201ENST00000410232 287 ntBASIC3.6□□□□□ -1.83
MEIS3Q99687 RN7SKP58-201ENST00000411010 305 ntBASIC3.6□□□□□ -1.83
MEIS3Q99687 AC127391.1-201ENST00000411737 98 ntBASIC3.6□□□□□ -1.83
MEIS3Q99687 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.6□□□□□ -1.83
MEIS3Q99687 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.6□□□□□ -1.83
MEIS3Q99687 PIGFP2-201ENST00000421400 651 ntBASIC3.6□□□□□ -1.83
MEIS3Q99687 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.6□□□□□ -1.83
MEIS3Q99687 AC007283.2-201ENST00000424739 197 ntBASIC3.6□□□□□ -1.83
MEIS3Q99687 AC019097.1-201ENST00000424783 735 ntBASIC3.6□□□□□ -1.83
MEIS3Q99687 RPS29P6-201ENST00000438196 145 ntBASIC3.6□□□□□ -1.83
MEIS3Q99687 RPL7P54-201ENST00000438336 674 ntBASIC3.6□□□□□ -1.83
MEIS3Q99687 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.6□□□□□ -1.83
MEIS3Q99687 FDX1P2-201ENST00000450769 375 ntBASIC3.6□□□□□ -1.83
MEIS3Q99687 IFNWP4-201ENST00000453148 294 ntBASIC3.6□□□□□ -1.83
MEIS3Q99687 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.6□□□□□ -1.83
MEIS3Q99687 MTND1P12-201ENST00000455231 147 ntBASIC3.6□□□□□ -1.83
MEIS3Q99687 HMGN1P10-201ENST00000474557 553 ntBASIC3.6□□□□□ -1.83
MEIS3Q99687 FAM172BP-201ENST00000487497 1089 ntBASIC3.6□□□□□ -1.83
MEIS3Q99687 AC083906.5-201ENST00000503722 328 ntBASIC3.6□□□□□ -1.83
MEIS3Q99687 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.6□□□□□ -1.83
MEIS3Q99687 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.6□□□□□ -1.83
MEIS3Q99687 LRRC34P2-201ENST00000514850 553 ntBASIC3.6□□□□□ -1.83
MEIS3Q99687 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.6□□□□□ -1.83
MEIS3Q99687 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.6□□□□□ -1.83
MEIS3Q99687 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.6□□□□□ -1.83
MEIS3Q99687 AL157687.1-201ENST00000554853 619 ntBASIC3.6□□□□□ -1.83
MEIS3Q99687 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.6□□□□□ -1.83
MEIS3Q99687 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.6□□□□□ -1.83
MEIS3Q99687 AC007363.1-201ENST00000604736 620 ntBASIC3.6□□□□□ -1.83
MEIS3Q99687 IGHV3-29-201ENST00000604817 344 ntBASIC3.6□□□□□ -1.83
MEIS3Q99687 AL133173.2-201ENST00000614270 90 ntBASIC3.6□□□□□ -1.83
MEIS3Q99687 AC010133.1-201ENST00000615809 842 ntBASIC3.6□□□□□ -1.83
MEIS3Q99687 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.6□□□□□ -1.83
MEIS3Q99687 AC096644.4-201ENST00000563417 2912 ntBASIC3.6□□□□□ -1.83
MEIS3Q99687 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.6□□□□□ -1.83
MEIS3Q99687 MTND5P17-201ENST00000418405 1603 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
MEIS3Q99687 RNU5E-1-201ENST00000362477 120 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 RNU4-73P-201ENST00000363164 141 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 RNU6-853P-201ENST00000364306 107 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
MEIS3Q99687 DSTNP4-201ENST00000399472 474 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 AC078974.1-201ENST00000411597 223 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 AC096664.2-201ENST00000411843 406 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.59□□□□□ -1.83
MEIS3Q99687 SDCBPP3-201ENST00000419629 891 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.59□□□□□ -1.83
MEIS3Q99687 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.59□□□□□ -1.83
MEIS3Q99687 RPS15AP9-201ENST00000439856 381 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.59□□□□□ -1.83
MEIS3Q99687 FAM103A2P-201ENST00000444122 354 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 RPL29P29-201ENST00000448725 423 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 AC132479.1-201ENST00000449160 144 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.59□□□□□ -1.83
MEIS3Q99687 NIPA2P5-201ENST00000452282 464 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.59□□□□□ -1.83
MEIS3Q99687 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.59□□□□□ -1.83
MEIS3Q99687 AC026410.2-201ENST00000460281 156 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.59□□□□□ -1.83
MEIS3Q99687 AC010683.1-201ENST00000473673 378 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 HIGD1AP13-201ENST00000509878 289 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 MTND3P22-201ENST00000510932 243 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.59□□□□□ -1.83
MEIS3Q99687 AC022616.6-201ENST00000520479 119 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.59□□□□□ -1.83
MEIS3Q99687 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.59□□□□□ -1.83
MEIS3Q99687 AF235103.2-201ENST00000525753 346 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 CENPUP1-201ENST00000526649 1202 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.59□□□□□ -1.83
MEIS3Q99687 AC079600.2-201ENST00000550076 130 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms