Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.4□□□□□ -1.87
PKP4Q99569 AC093908.1-201ENST00000623125 8092 ntBASIC3.39□□□□□ -1.87
PKP4Q99569 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PKP4Q99569 CASC19-280ENST00000642102 1351 ntBASIC3.39□□□□□ -1.87
PKP4Q99569 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PKP4Q99569 MFSD8-233ENST00000641482 4860 ntBASIC3.39□□□□□ -1.87
PKP4Q99569 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.39□□□□□ -1.87
PKP4Q99569 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PKP4Q99569 RNU6-694P-201ENST00000364071 147 ntBASIC3.39□□□□□ -1.87
PKP4Q99569 RNU6-282P-201ENST00000365357 103 ntBASIC3.39□□□□□ -1.87
PKP4Q99569 RNU6-877P-201ENST00000383868 107 ntBASIC3.39□□□□□ -1.87
PKP4Q99569 RNU6-483P-201ENST00000384088 108 ntBASIC3.39□□□□□ -1.87
PKP4Q99569 MT-TL1-201ENST00000386347 75 ntBASIC3.39□□□□□ -1.87
PKP4Q99569 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.39□□□□□ -1.87
PKP4Q99569 AC091286.1-201ENST00000431233 461 ntBASIC3.39□□□□□ -1.87
PKP4Q99569 ATP5JP1-201ENST00000431631 322 ntBASIC3.39□□□□□ -1.87
PKP4Q99569 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.39□□□□□ -1.87
PKP4Q99569 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.39□□□□□ -1.87
PKP4Q99569 RPL21P23-201ENST00000446654 460 ntBASIC3.39□□□□□ -1.87
PKP4Q99569 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.39□□□□□ -1.87
PKP4Q99569 snoU13.8-201ENST00000458890 104 ntBASIC3.39□□□□□ -1.87
PKP4Q99569 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.39□□□□□ -1.87
PKP4Q99569 SNORD59.2-201ENST00000516873 68 ntBASIC3.39□□□□□ -1.87
PKP4Q99569 AC103843.2-201ENST00000530523 682 ntBASIC3.39□□□□□ -1.87
PKP4Q99569 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.39□□□□□ -1.87
PKP4Q99569 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.39□□□□□ -1.87
PKP4Q99569 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.39□□□□□ -1.87
PKP4Q99569 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.39□□□□□ -1.87
PKP4Q99569 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.39□□□□□ -1.87
PKP4Q99569 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.39□□□□□ -1.87
PKP4Q99569 AC090615.1-201ENST00000577519 154 ntBASIC3.39□□□□□ -1.87
PKP4Q99569 MIR3158-1-201ENST00000583596 81 ntBASIC3.39□□□□□ -1.87
PKP4Q99569 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.39□□□□□ -1.87
PKP4Q99569 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.39□□□□□ -1.87
PKP4Q99569 AC004853.1-201ENST00000604902 698 ntBASIC3.39□□□□□ -1.87
PKP4Q99569 AC008962.1-201ENST00000605729 304 ntBASIC3.39□□□□□ -1.87
PKP4Q99569 MIR7851-201ENST00000610611 160 ntBASIC3.39□□□□□ -1.87
PKP4Q99569 AL020991.1-201ENST00000612314 373 ntBASIC3.39□□□□□ -1.87
PKP4Q99569 AC006133.1-201ENST00000617106 264 ntBASIC3.39□□□□□ -1.87
PKP4Q99569 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
PKP4Q99569 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
PKP4Q99569 AC139792.3-201ENST00000623525 224 ntBASIC3.39□□□□□ -1.87
PKP4Q99569 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.39□□□□□ -1.87
PKP4Q99569 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.39□□□□□ -1.87
PKP4Q99569 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKP4Q99569 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKP4Q99569 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKP4Q99569 AC009812.4-201ENST00000569134 1805 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKP4Q99569 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PKP4Q99569 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKP4Q99569 RNU5E-1-201ENST00000362477 120 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 Y_RNA.38-201ENST00000362617 102 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 SNORA48.8-201ENST00000391324 134 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 RNU2-43P-201ENST00000410306 190 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 MTND4P28-201ENST00000426217 387 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 AL158071.1-201ENST00000430315 461 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 MTND3P23-201ENST00000431980 347 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 AL049734.2-201ENST00000441066 616 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.38□□□□□ -1.87
PKP4Q99569 USP9YP15-201ENST00000442391 422 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 AL357552.1-201ENST00000445254 415 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 AC007967.1-201ENST00000455422 1159 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.38□□□□□ -1.87
PKP4Q99569 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.38□□□□□ -1.87
PKP4Q99569 AC025518.1-201ENST00000479856 347 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 RPL23AP41-201ENST00000484754 458 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 AC079382.1-201ENST00000493346 557 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.38□□□□□ -1.87
PKP4Q99569 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.38□□□□□ -1.87
PKP4Q99569 AC046134.1-201ENST00000514454 666 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 SNORA67.7-201ENST00000516664 135 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 FAM60DP-201ENST00000524174 632 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.38□□□□□ -1.87
PKP4Q99569 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.38□□□□□ -1.87
PKP4Q99569 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.38□□□□□ -1.87
PKP4Q99569 OR5B10P-201ENST00000532869 642 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.38□□□□□ -1.87
PKP4Q99569 OR4T1P-201ENST00000554933 911 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.38□□□□□ -1.87
PKP4Q99569 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.38□□□□□ -1.87
PKP4Q99569 MIR3118-1-201ENST00000581787 76 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
PKP4Q99569 AC067852.3-201ENST00000589177 561 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 AC060780.3-201ENST00000589464 80 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 AC008739.3-201ENST00000603262 127 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 AC106900.2-201ENST00000604994 317 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 AP001330.5-201ENST00000607176 411 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 AP002826.1-201ENST00000608835 315 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.38□□□□□ -1.87
PKP4Q99569 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PKP4Q99569 RNVU1-4-201ENST00000612985 164 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 MIR6076-201ENST00000617521 113 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 AC006111.3-201ENST00000622137 383 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 AC243312.2-201ENST00000623340 601 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 AC091953.2-201ENST00000623979 160 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 AC009033.1-201ENST00000624279 431 ntBASIC3.38□□□□□ -1.87
PKP4Q99569 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms