Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM47Q96LD4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
TRIM47Q96LD4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM47Q96LD4 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.74□□□□□ -1.49
TRIM47Q96LD4 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM47Q96LD4 XIAPP3-201ENST00000312918 795 ntBASIC5.74□□□□□ -1.49
TRIM47Q96LD4 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM47Q96LD4 RN7SKP16-201ENST00000410180 299 ntBASIC5.74□□□□□ -1.49
TRIM47Q96LD4 AL030996.1-201ENST00000411430 235 ntBASIC5.74□□□□□ -1.49
TRIM47Q96LD4 BX510359.2-201ENST00000417920 305 ntBASIC5.74□□□□□ -1.49
TRIM47Q96LD4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM47Q96LD4 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM47Q96LD4 RPL23AP1-201ENST00000428990 471 ntBASIC5.74□□□□□ -1.49
TRIM47Q96LD4 AL159987.2-201ENST00000432754 307 ntBASIC5.74□□□□□ -1.49
TRIM47Q96LD4 RN7SL443P-201ENST00000464331 290 ntBASIC5.74□□□□□ -1.49
TRIM47Q96LD4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.74□□□□□ -1.49
TRIM47Q96LD4 SNORD116-25-201ENST00000516517 92 ntBASIC5.74□□□□□ -1.49
TRIM47Q96LD4 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM47Q96LD4 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.74□□□□□ -1.49
TRIM47Q96LD4 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.74□□□□□ -1.49
TRIM47Q96LD4 H3F3AP1-201ENST00000559984 334 ntBASIC5.74□□□□□ -1.49
TRIM47Q96LD4 AC005951.2-201ENST00000576282 495 ntBASIC5.74□□□□□ -1.49
TRIM47Q96LD4 MIR4308-201ENST00000580634 81 ntBASIC5.74□□□□□ -1.49
TRIM47Q96LD4 MIR4282-201ENST00000583613 67 ntBASIC5.74□□□□□ -1.49
TRIM47Q96LD4 RPL23AP92-201ENST00000603609 255 ntBASIC5.74□□□□□ -1.49
TRIM47Q96LD4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM47Q96LD4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM47Q96LD4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC5.74□□□□□ -1.49
TRIM47Q96LD4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM47Q96LD4 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM47Q96LD4 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM47Q96LD4 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
TRIM47Q96LD4 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM47Q96LD4 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.74□□□□□ -1.49
TRIM47Q96LD4 AC008568.2-201ENST00000623862 2313 ntBASIC5.74□□□□□ -1.49
TRIM47Q96LD4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM47Q96LD4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM47Q96LD4 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
TRIM47Q96LD4 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
TRIM47Q96LD4 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM47Q96LD4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM47Q96LD4 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM47Q96LD4 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM47Q96LD4 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
TRIM47Q96LD4 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM47Q96LD4 RNU6-834P-201ENST00000362367 110 ntBASIC5.73□□□□□ -1.49
TRIM47Q96LD4 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM47Q96LD4 SNORA70F-201ENST00000384142 135 ntBASIC5.73□□□□□ -1.49
TRIM47Q96LD4 RNU6-80P-201ENST00000384195 107 ntBASIC5.73□□□□□ -1.49
TRIM47Q96LD4 MIR569-201ENST00000385228 96 ntBASIC5.73□□□□□ -1.49
TRIM47Q96LD4 AL139039.1-201ENST00000401900 692 ntBASIC5.73□□□□□ -1.49
TRIM47Q96LD4 AL357075.1-201ENST00000404107 726 ntBASIC5.73□□□□□ -1.49
TRIM47Q96LD4 AL035079.1-201ENST00000405210 287 ntBASIC5.73□□□□□ -1.49
TRIM47Q96LD4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.73□□□□□ -1.49
TRIM47Q96LD4 RNA5SP107-201ENST00000411358 122 ntBASIC5.73□□□□□ -1.49
TRIM47Q96LD4 AL732292.1-201ENST00000426692 226 ntBASIC5.73□□□□□ -1.49
TRIM47Q96LD4 AC006946.1-201ENST00000429106 328 ntBASIC5.73□□□□□ -1.49
TRIM47Q96LD4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM47Q96LD4 PIGFP3-201ENST00000441918 722 ntBASIC5.73□□□□□ -1.49
TRIM47Q96LD4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.73□□□□□ -1.49
TRIM47Q96LD4 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM47Q96LD4 AC010733.1-201ENST00000451515 401 ntBASIC5.73□□□□□ -1.49
TRIM47Q96LD4 HSPE1P25-201ENST00000455484 251 ntBASIC5.73□□□□□ -1.49
TRIM47Q96LD4 TRBV26-201ENST00000456572 344 ntBASIC5.73□□□□□ -1.49
TRIM47Q96LD4 Y_RNA.638-201ENST00000459374 113 ntBASIC5.73□□□□□ -1.49
TRIM47Q96LD4 AC026402.1-201ENST00000513642 170 ntBASIC5.73□□□□□ -1.49
TRIM47Q96LD4 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.73□□□□□ -1.49
TRIM47Q96LD4 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.73□□□□□ -1.49
TRIM47Q96LD4 AP002001.1-203ENST00000534002 267 ntBASIC5.73□□□□□ -1.49
TRIM47Q96LD4 AL442163.3-201ENST00000554110 156 ntBASIC5.73□□□□□ -1.49
TRIM47Q96LD4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM47Q96LD4 AL356218.2-201ENST00000605264 187 ntBASIC5.73□□□□□ -1.49
TRIM47Q96LD4 Y_RNA.772-201ENST00000606692 102 ntBASIC5.73□□□□□ -1.49
TRIM47Q96LD4 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM47Q96LD4 MIR6853-201ENST00000619642 74 ntBASIC5.73□□□□□ -1.49
TRIM47Q96LD4 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.73□□□□□ -1.49
TRIM47Q96LD4 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM47Q96LD4 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM47Q96LD4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM47Q96LD4 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM47Q96LD4 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
TRIM47Q96LD4 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
TRIM47Q96LD4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
TRIM47Q96LD4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM47Q96LD4 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM47Q96LD4 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM47Q96LD4 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM47Q96LD4 AC008079.2-201ENST00000623543 20396 ntBASIC5.72□□□□□ -1.49
TRIM47Q96LD4 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM47Q96LD4 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
TRIM47Q96LD4 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.72□□□□□ -1.49
TRIM47Q96LD4 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM47Q96LD4 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
TRIM47Q96LD4 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM47Q96LD4 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
TRIM47Q96LD4 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM47Q96LD4 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
TRIM47Q96LD4 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM47Q96LD4 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TRIM47Q96LD4 RNU4-90P-201ENST00000362773 141 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms