Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SIX5Q8N196 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SIX5Q8N196 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
SIX5Q8N196 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SIX5Q8N196 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SIX5Q8N196 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SIX5Q8N196 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.26□□□□□ -1.57
SIX5Q8N196 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SIX5Q8N196 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.26□□□□□ -1.57
SIX5Q8N196 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SIX5Q8N196 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.26□□□□□ -1.57
SIX5Q8N196 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SIX5Q8N196 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SIX5Q8N196 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.26□□□□□ -1.57
SIX5Q8N196 AC007685.1-201ENST00000329806 452 ntBASIC5.26□□□□□ -1.57
SIX5Q8N196 RNA5SP191-201ENST00000362585 102 ntBASIC5.26□□□□□ -1.57
SIX5Q8N196 RNU6-595P-201ENST00000363944 107 ntBASIC5.26□□□□□ -1.57
SIX5Q8N196 U3.10-201ENST00000364459 214 ntBASIC5.26□□□□□ -1.57
SIX5Q8N196 RNA5SP479-201ENST00000364858 117 ntBASIC5.26□□□□□ -1.57
SIX5Q8N196 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.26□□□□□ -1.57
SIX5Q8N196 Y_RNA.478-201ENST00000384358 107 ntBASIC5.26□□□□□ -1.57
SIX5Q8N196 U3.42-201ENST00000408746 214 ntBASIC5.26□□□□□ -1.57
SIX5Q8N196 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.26□□□□□ -1.57
SIX5Q8N196 AC091390.3-201ENST00000426478 338 ntBASIC5.26□□□□□ -1.57
SIX5Q8N196 MTND4LP30-201ENST00000454092 297 ntBASIC5.26□□□□□ -1.57
SIX5Q8N196 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.26□□□□□ -1.57
SIX5Q8N196 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.26□□□□□ -1.57
SIX5Q8N196 AL160314.1-201ENST00000490836 438 ntBASIC5.26□□□□□ -1.57
SIX5Q8N196 AK3P2-201ENST00000507976 429 ntBASIC5.26□□□□□ -1.57
SIX5Q8N196 AL359273.1-201ENST00000510918 627 ntBASIC5.26□□□□□ -1.57
SIX5Q8N196 SCARNA15.2-201ENST00000516409 127 ntBASIC5.26□□□□□ -1.57
SIX5Q8N196 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.26□□□□□ -1.57
SIX5Q8N196 AC034114.1-201ENST00000520293 285 ntBASIC5.26□□□□□ -1.57
SIX5Q8N196 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC5.26□□□□□ -1.57
SIX5Q8N196 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.26□□□□□ -1.57
SIX5Q8N196 MIR5701-3-201ENST00000578890 82 ntBASIC5.26□□□□□ -1.57
SIX5Q8N196 MIR5701-1-201ENST00000585138 82 ntBASIC5.26□□□□□ -1.57
SIX5Q8N196 AC060780.2-201ENST00000589047 198 ntBASIC5.26□□□□□ -1.57
SIX5Q8N196 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SIX5Q8N196 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SIX5Q8N196 AC008121.1-201ENST00000603244 268 ntBASIC5.26□□□□□ -1.57
SIX5Q8N196 AL391358.1-201ENST00000605342 190 ntBASIC5.26□□□□□ -1.57
SIX5Q8N196 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.26□□□□□ -1.57
SIX5Q8N196 AC008962.1-201ENST00000605729 304 ntBASIC5.26□□□□□ -1.57
SIX5Q8N196 AL365434.2-201ENST00000607979 234 ntBASIC5.26□□□□□ -1.57
SIX5Q8N196 MIR5701-2-201ENST00000615634 82 ntBASIC5.26□□□□□ -1.57
SIX5Q8N196 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.26□□□□□ -1.57
SIX5Q8N196 SDR42E1P4-201ENST00000620894 481 ntBASIC5.26□□□□□ -1.57
SIX5Q8N196 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SIX5Q8N196 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SIX5Q8N196 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SIX5Q8N196 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SIX5Q8N196 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
SIX5Q8N196 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.26□□□□□ -1.57
SIX5Q8N196 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
SIX5Q8N196 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SIX5Q8N196 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
SIX5Q8N196 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SIX5Q8N196 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SIX5Q8N196 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SIX5Q8N196 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.25□□□□□ -1.57
SIX5Q8N196 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.25□□□□□ -1.57
SIX5Q8N196 AL356489.2-201ENST00000566968 3528 ntBASIC5.25□□□□□ -1.57
SIX5Q8N196 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
SIX5Q8N196 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.25□□□□□ -1.57
SIX5Q8N196 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
SIX5Q8N196 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SIX5Q8N196 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SIX5Q8N196 RNU1-76P-201ENST00000362903 159 ntBASIC5.25□□□□□ -1.57
SIX5Q8N196 RNU6-384P-201ENST00000364900 104 ntBASIC5.25□□□□□ -1.57
SIX5Q8N196 Y_RNA.562-201ENST00000384695 113 ntBASIC5.25□□□□□ -1.57
SIX5Q8N196 Y_RNA.592-201ENST00000410274 109 ntBASIC5.25□□□□□ -1.57
SIX5Q8N196 RNU4-61P-201ENST00000411243 107 ntBASIC5.25□□□□□ -1.57
SIX5Q8N196 AL592148.1-201ENST00000413568 445 ntBASIC5.25□□□□□ -1.57
SIX5Q8N196 RPS12P23-201ENST00000419579 400 ntBASIC5.25□□□□□ -1.57
SIX5Q8N196 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.25□□□□□ -1.57
SIX5Q8N196 AL356867.1-201ENST00000429623 299 ntBASIC5.25□□□□□ -1.57
SIX5Q8N196 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.25□□□□□ -1.57
SIX5Q8N196 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.25□□□□□ -1.57
SIX5Q8N196 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.25□□□□□ -1.57
SIX5Q8N196 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.25□□□□□ -1.57
SIX5Q8N196 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.25□□□□□ -1.57
SIX5Q8N196 RPL12P20-201ENST00000475538 479 ntBASIC5.25□□□□□ -1.57
SIX5Q8N196 RNU6-1256P-201ENST00000516539 103 ntBASIC5.25□□□□□ -1.57
SIX5Q8N196 RNA5SP43-201ENST00000516559 110 ntBASIC5.25□□□□□ -1.57
SIX5Q8N196 RNA5SP290-201ENST00000517133 127 ntBASIC5.25□□□□□ -1.57
SIX5Q8N196 RN7SKP92-201ENST00000517266 244 ntBASIC5.25□□□□□ -1.57
SIX5Q8N196 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.25□□□□□ -1.57
SIX5Q8N196 MIR3921-201ENST00000577308 85 ntBASIC5.25□□□□□ -1.57
SIX5Q8N196 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SIX5Q8N196 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SIX5Q8N196 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SIX5Q8N196 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SIX5Q8N196 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SIX5Q8N196 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SIX5Q8N196 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SIX5Q8N196 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.24□□□□□ -1.57
SIX5Q8N196 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SIX5Q8N196 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
SIX5Q8N196 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms