Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.93□□□□□ -1.62
RNF43Q68DV7 AL356218.2-201ENST00000605264 187 ntBASIC4.93□□□□□ -1.62
RNF43Q68DV7 FAM27B-201ENST00000610601 213 ntBASIC4.93□□□□□ -1.62
RNF43Q68DV7 AL589994.2-201ENST00000621124 579 ntBASIC4.93□□□□□ -1.62
RNF43Q68DV7 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF43Q68DV7 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.93□□□□□ -1.62
RNF43Q68DV7 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.93□□□□□ -1.62
RNF43Q68DV7 IQCB2P-201ENST00000401788 1633 ntBASIC4.93□□□□□ -1.62
RNF43Q68DV7 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF43Q68DV7 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RNF43Q68DV7 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RNF43Q68DV7 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF43Q68DV7 DDX18P3-201ENST00000404856 2007 ntBASIC4.92□□□□□ -1.62
RNF43Q68DV7 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
RNF43Q68DV7 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RNF43Q68DV7 MAPK10-320ENST00000641462 6696 ntBASIC4.92□□□□□ -1.62
RNF43Q68DV7 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNF43Q68DV7 Y_RNA.237-201ENST00000364439 102 ntBASIC4.92□□□□□ -1.62
RNF43Q68DV7 RNU6-1078P-201ENST00000364522 103 ntBASIC4.92□□□□□ -1.62
RNF43Q68DV7 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNF43Q68DV7 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
RNF43Q68DV7 RNU6-1293P-201ENST00000384077 107 ntBASIC4.92□□□□□ -1.62
RNF43Q68DV7 RNU6-378P-201ENST00000384324 107 ntBASIC4.92□□□□□ -1.62
RNF43Q68DV7 SNORA57.1-201ENST00000391227 145 ntBASIC4.92□□□□□ -1.62
RNF43Q68DV7 SNORD58.1-201ENST00000391313 66 ntBASIC4.92□□□□□ -1.62
RNF43Q68DV7 U3.35-201ENST00000408405 208 ntBASIC4.92□□□□□ -1.62
RNF43Q68DV7 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.92□□□□□ -1.62
RNF43Q68DV7 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.92□□□□□ -1.62
RNF43Q68DV7 MTCO3P29-201ENST00000432119 779 ntBASIC4.92□□□□□ -1.62
RNF43Q68DV7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.92□□□□□ -1.62
RNF43Q68DV7 TDGF1P1-201ENST00000445734 527 ntBASIC4.92□□□□□ -1.62
RNF43Q68DV7 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.92□□□□□ -1.62
RNF43Q68DV7 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.92□□□□□ -1.62
RNF43Q68DV7 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.92□□□□□ -1.62
RNF43Q68DV7 COX7A2P2-201ENST00000505291 250 ntBASIC4.92□□□□□ -1.62
RNF43Q68DV7 RNU4-71P-201ENST00000516258 113 ntBASIC4.92□□□□□ -1.62
RNF43Q68DV7 RNU7-4P-201ENST00000516961 62 ntBASIC4.92□□□□□ -1.62
RNF43Q68DV7 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.92□□□□□ -1.62
RNF43Q68DV7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.92□□□□□ -1.62
RNF43Q68DV7 MIR3160-1-201ENST00000577972 85 ntBASIC4.92□□□□□ -1.62
RNF43Q68DV7 SNORA74C-1-201ENST00000580726 201 ntBASIC4.92□□□□□ -1.62
RNF43Q68DV7 AC093227.2-201ENST00000589357 285 ntBASIC4.92□□□□□ -1.62
RNF43Q68DV7 AL390123.1-201ENST00000603216 237 ntBASIC4.92□□□□□ -1.62
RNF43Q68DV7 AL158032.1-201ENST00000605401 106 ntBASIC4.92□□□□□ -1.62
RNF43Q68DV7 MIR6853-201ENST00000619642 74 ntBASIC4.92□□□□□ -1.62
RNF43Q68DV7 RNU6-156P-201ENST00000621869 107 ntBASIC4.92□□□□□ -1.62
RNF43Q68DV7 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNF43Q68DV7 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RNF43Q68DV7 AL122126.1-201ENST00000546905 1318 ntBASIC4.92□□□□□ -1.62
RNF43Q68DV7 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RNF43Q68DV7 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNF43Q68DV7 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.91□□□□□ -1.62
RNF43Q68DV7 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.91□□□□□ -1.62
RNF43Q68DV7 AC092435.4-201ENST00000623012 4159 ntBASIC4.91□□□□□ -1.62
RNF43Q68DV7 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.91□□□□□ -1.62
RNF43Q68DV7 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RNF43Q68DV7 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RNF43Q68DV7 Y_RNA.54-201ENST00000362766 105 ntBASIC4.91□□□□□ -1.62
RNF43Q68DV7 Y_RNA.84-201ENST00000363011 104 ntBASIC4.91□□□□□ -1.62
RNF43Q68DV7 RNU1-20P-201ENST00000363314 162 ntBASIC4.91□□□□□ -1.62
RNF43Q68DV7 SMIM11P1-201ENST00000369586 178 ntBASIC4.91□□□□□ -1.62
RNF43Q68DV7 Y_RNA.471-201ENST00000384312 102 ntBASIC4.91□□□□□ -1.62
RNF43Q68DV7 RNU6-493P-201ENST00000391321 108 ntBASIC4.91□□□□□ -1.62
RNF43Q68DV7 AL139039.1-201ENST00000401900 692 ntBASIC4.91□□□□□ -1.62
RNF43Q68DV7 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.91□□□□□ -1.62
RNF43Q68DV7 AL603910.2-201ENST00000407268 136 ntBASIC4.91□□□□□ -1.62
RNF43Q68DV7 RNU6-1140P-201ENST00000410517 106 ntBASIC4.91□□□□□ -1.62
RNF43Q68DV7 Y_RNA.793-201ENST00000411222 111 ntBASIC4.91□□□□□ -1.62
RNF43Q68DV7 AL451074.5-201ENST00000415894 435 ntBASIC4.91□□□□□ -1.62
RNF43Q68DV7 UBE2D3P2-201ENST00000424409 445 ntBASIC4.91□□□□□ -1.62
RNF43Q68DV7 AC016831.4-201ENST00000438302 307 ntBASIC4.91□□□□□ -1.62
RNF43Q68DV7 RPS17P13-201ENST00000448974 407 ntBASIC4.91□□□□□ -1.62
RNF43Q68DV7 RN7SL432P-201ENST00000484057 298 ntBASIC4.91□□□□□ -1.62
RNF43Q68DV7 AC110792.1-201ENST00000491826 472 ntBASIC4.91□□□□□ -1.62
RNF43Q68DV7 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.91□□□□□ -1.62
RNF43Q68DV7 RNU1-6P-201ENST00000516290 144 ntBASIC4.91□□□□□ -1.62
RNF43Q68DV7 RNU6-709P-201ENST00000517257 104 ntBASIC4.91□□□□□ -1.62
RNF43Q68DV7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.91□□□□□ -1.62
RNF43Q68DV7 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.91□□□□□ -1.62
RNF43Q68DV7 ELOCP5-201ENST00000604924 333 ntBASIC4.91□□□□□ -1.62
RNF43Q68DV7 AL161637.1-201ENST00000622380 412 ntBASIC4.91□□□□□ -1.62
RNF43Q68DV7 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RNF43Q68DV7 AC139713.2-215ENST00000641428 5037 ntBASIC4.91□□□□□ -1.62
RNF43Q68DV7 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.91□□□□□ -1.62
RNF43Q68DV7 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RNF43Q68DV7 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RNF43Q68DV7 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.9□□□□□ -1.62
RNF43Q68DV7 AL672167.1-203ENST00000641299 2975 ntBASIC4.9□□□□□ -1.62
RNF43Q68DV7 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
RNF43Q68DV7 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.9□□□□□ -1.62
RNF43Q68DV7 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
RNF43Q68DV7 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RNF43Q68DV7 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
RNF43Q68DV7 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RNF43Q68DV7 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
RNF43Q68DV7 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RNF43Q68DV7 AL391987.6-201ENST00000305671 199 ntBASIC4.9□□□□□ -1.63
RNF43Q68DV7 Y_RNA.200-201ENST00000364018 102 ntBASIC4.9□□□□□ -1.63
RNF43Q68DV7 RNU6-611P-201ENST00000384276 104 ntBASIC4.9□□□□□ -1.63
RNF43Q68DV7 RNU6-516P-201ENST00000411381 104 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms