Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 AC233279.1-201ENST00000455300 423 ntBASIC1.92□□□□□ -2.1
SSX1Q16384 RPL12P25-201ENST00000455592 494 ntBASIC1.92□□□□□ -2.1
SSX1Q16384 RPS29P20-201ENST00000489592 171 ntBASIC1.92□□□□□ -2.1
SSX1Q16384 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.92□□□□□ -2.1
SSX1Q16384 RNU1-40P-201ENST00000516816 164 ntBASIC1.92□□□□□ -2.1
SSX1Q16384 RNU1-97P-201ENST00000516872 164 ntBASIC1.92□□□□□ -2.1
SSX1Q16384 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.92□□□□□ -2.1
SSX1Q16384 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.92□□□□□ -2.1
SSX1Q16384 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.92□□□□□ -2.1
SSX1Q16384 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SSX1Q16384 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.92□□□□□ -2.1
SSX1Q16384 VN1R92P-201ENST00000598511 928 ntBASIC1.92□□□□□ -2.1
SSX1Q16384 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.92□□□□□ -2.1
SSX1Q16384 MIR6840-201ENST00000611937 71 ntBASIC1.92□□□□□ -2.1
SSX1Q16384 AC104763.3-201ENST00000613765 618 ntBASIC1.92□□□□□ -2.1
SSX1Q16384 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.92□□□□□ -2.1
SSX1Q16384 AC009268.2-201ENST00000621925 457 ntBASIC1.92□□□□□ -2.1
SSX1Q16384 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.92□□□□□ -2.1
SSX1Q16384 AC019226.1-201ENST00000625666 515 ntBASIC1.92□□□□□ -2.1
SSX1Q16384 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.92□□□□□ -2.1
SSX1Q16384 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.92□□□□□ -2.1
SSX1Q16384 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
SSX1Q16384 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SSX1Q16384 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SSX1Q16384 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
SSX1Q16384 GNG5P1-201ENST00000255500 204 ntBASIC1.91□□□□□ -2.1
SSX1Q16384 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SSX1Q16384 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.91□□□□□ -2.1
SSX1Q16384 RNU6-884P-201ENST00000363889 107 ntBASIC1.91□□□□□ -2.1
SSX1Q16384 SNORA67.4-201ENST00000384688 142 ntBASIC1.91□□□□□ -2.1
SSX1Q16384 RNU6-516P-201ENST00000411381 104 ntBASIC1.91□□□□□ -2.1
SSX1Q16384 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.91□□□□□ -2.1
SSX1Q16384 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.91□□□□□ -2.1
SSX1Q16384 AL451054.2-201ENST00000420896 202 ntBASIC1.91□□□□□ -2.1
SSX1Q16384 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.91□□□□□ -2.1
SSX1Q16384 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.91□□□□□ -2.1
SSX1Q16384 RPS15AP5-201ENST00000436276 388 ntBASIC1.91□□□□□ -2.1
SSX1Q16384 COX7BP2-201ENST00000437976 242 ntBASIC1.91□□□□□ -2.1
SSX1Q16384 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.91□□□□□ -2.1
SSX1Q16384 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.91□□□□□ -2.1
SSX1Q16384 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.91□□□□□ -2.1
SSX1Q16384 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.91□□□□□ -2.1
SSX1Q16384 RNU7-26P-201ENST00000458980 63 ntBASIC1.91□□□□□ -2.1
SSX1Q16384 RN7SL432P-201ENST00000484057 298 ntBASIC1.91□□□□□ -2.1
SSX1Q16384 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.91□□□□□ -2.1
SSX1Q16384 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.91□□□□□ -2.1
SSX1Q16384 RNU6-150P-201ENST00000516237 95 ntBASIC1.91□□□□□ -2.1
SSX1Q16384 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.91□□□□□ -2.1
SSX1Q16384 MTCYBP20-201ENST00000524239 1129 ntBASIC1.91□□□□□ -2.1
SSX1Q16384 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.91□□□□□ -2.1
SSX1Q16384 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.91□□□□□ -2.1
SSX1Q16384 CYCSP2-201ENST00000558168 301 ntBASIC1.91□□□□□ -2.1
SSX1Q16384 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.91□□□□□ -2.1
SSX1Q16384 AL512347.1-201ENST00000566420 503 ntBASIC1.91□□□□□ -2.1
SSX1Q16384 RPS3AP23-202ENST00000574601 686 ntBASIC1.91□□□□□ -2.1
SSX1Q16384 LARP7P3-201ENST00000579888 337 ntBASIC1.91□□□□□ -2.1
SSX1Q16384 OR4K7P-201ENST00000580232 945 ntBASIC1.91□□□□□ -2.1
SSX1Q16384 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.91□□□□□ -2.1
SSX1Q16384 AL356280.1-201ENST00000603614 379 ntBASIC1.91□□□□□ -2.1
SSX1Q16384 AL139344.1-201ENST00000605228 195 ntBASIC1.91□□□□□ -2.1
SSX1Q16384 HMGB1P24-202ENST00000615653 685 ntBASIC1.91□□□□□ -2.1
SSX1Q16384 AC010133.1-201ENST00000615809 842 ntBASIC1.91□□□□□ -2.1
SSX1Q16384 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.91□□□□□ -2.1
SSX1Q16384 AC068057.2-201ENST00000624047 895 ntBASIC1.91□□□□□ -2.1
SSX1Q16384 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.91□□□□□ -2.1
SSX1Q16384 AL137003.2-201ENST00000606924 2538 ntBASIC1.91□□□□□ -2.1
SSX1Q16384 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.91□□□□□ -2.1
SSX1Q16384 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.91□□□□□ -2.1
SSX1Q16384 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SSX1Q16384 AC011477.1-204ENST00000623416 1325 ntBASIC1.91□□□□□ -2.1
SSX1Q16384 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.91□□□□□ -2.1
SSX1Q16384 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
SSX1Q16384 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.9□□□□□ -2.1
SSX1Q16384 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
SSX1Q16384 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
SSX1Q16384 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.1
SSX1Q16384 AL390862.1-201ENST00000635467 1469 ntBASIC1.9□□□□□ -2.11
SSX1Q16384 AC009487.4-201ENST00000624969 3585 ntBASIC1.9□□□□□ -2.11
SSX1Q16384 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SSX1Q16384 MIR221-201ENST00000385135 110 ntBASIC1.9□□□□□ -2.11
SSX1Q16384 SNORA40.4-201ENST00000390971 128 ntBASIC1.9□□□□□ -2.11
SSX1Q16384 RPL23AP29-201ENST00000397284 453 ntBASIC1.9□□□□□ -2.11
SSX1Q16384 MIR888-201ENST00000401186 77 ntBASIC1.9□□□□□ -2.11
SSX1Q16384 AL356421.1-201ENST00000403255 413 ntBASIC1.9□□□□□ -2.11
SSX1Q16384 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.9□□□□□ -2.11
SSX1Q16384 RNU6-1328P-201ENST00000410938 106 ntBASIC1.9□□□□□ -2.11
SSX1Q16384 MTND1P21-201ENST00000412991 285 ntBASIC1.9□□□□□ -2.11
SSX1Q16384 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.9□□□□□ -2.11
SSX1Q16384 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.9□□□□□ -2.11
SSX1Q16384 OR10R1P-201ENST00000441524 1141 ntBASIC1.9□□□□□ -2.11
SSX1Q16384 COX6CP12-201ENST00000446748 202 ntBASIC1.9□□□□□ -2.11
SSX1Q16384 MTCO2P25-201ENST00000447065 681 ntBASIC1.9□□□□□ -2.11
SSX1Q16384 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.9□□□□□ -2.11
SSX1Q16384 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.9□□□□□ -2.11
SSX1Q16384 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.9□□□□□ -2.11
SSX1Q16384 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SSX1Q16384 RPS3P1-201ENST00000456781 192 ntBASIC1.9□□□□□ -2.11
SSX1Q16384 HMGB1P36-201ENST00000487709 576 ntBASIC1.9□□□□□ -2.11
SSX1Q16384 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.9□□□□□ -2.11
SSX1Q16384 SNORA31.18-201ENST00000517043 134 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 149.8 ms