Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC093156.1-201ENST00000440382 670 ntBASIC3.39□□□□□ -1.87
LTBQ06643 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.39□□□□□ -1.87
LTBQ06643 AC140076.1-201ENST00000449897 361 ntBASIC3.39□□□□□ -1.87
LTBQ06643 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.39□□□□□ -1.87
LTBQ06643 AL356010.1-201ENST00000456364 102 ntBASIC3.39□□□□□ -1.87
LTBQ06643 BX510359.1-201ENST00000456973 237 ntBASIC3.39□□□□□ -1.87
LTBQ06643 U8.18-201ENST00000459285 133 ntBASIC3.39□□□□□ -1.87
LTBQ06643 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.39□□□□□ -1.87
LTBQ06643 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LTBQ06643 HMGN1P11-201ENST00000508668 303 ntBASIC3.39□□□□□ -1.87
LTBQ06643 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LTBQ06643 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.39□□□□□ -1.87
LTBQ06643 AC017037.2-201ENST00000513850 890 ntBASIC3.39□□□□□ -1.87
LTBQ06643 AC114797.1-201ENST00000514003 728 ntBASIC3.39□□□□□ -1.87
LTBQ06643 SNORD27.1-201ENST00000516319 72 ntBASIC3.39□□□□□ -1.87
LTBQ06643 RN7SKP57-201ENST00000517248 293 ntBASIC3.39□□□□□ -1.87
LTBQ06643 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.39□□□□□ -1.87
LTBQ06643 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.39□□□□□ -1.87
LTBQ06643 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.39□□□□□ -1.87
LTBQ06643 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.39□□□□□ -1.87
LTBQ06643 AC078814.3-201ENST00000553036 491 ntBASIC3.39□□□□□ -1.87
LTBQ06643 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.39□□□□□ -1.87
LTBQ06643 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.39□□□□□ -1.87
LTBQ06643 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.39□□□□□ -1.87
LTBQ06643 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.39□□□□□ -1.87
LTBQ06643 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.39□□□□□ -1.87
LTBQ06643 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.39□□□□□ -1.87
LTBQ06643 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.39□□□□□ -1.87
LTBQ06643 AP001029.3-201ENST00000588063 596 ntBASIC3.39□□□□□ -1.87
LTBQ06643 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.39□□□□□ -1.87
LTBQ06643 VN1R80P-201ENST00000597126 338 ntBASIC3.39□□□□□ -1.87
LTBQ06643 AC004825.2-201ENST00000616634 455 ntBASIC3.39□□□□□ -1.87
LTBQ06643 AC002550.2-201ENST00000621246 394 ntBASIC3.39□□□□□ -1.87
LTBQ06643 AC090617.10-201ENST00000624308 134 ntBASIC3.39□□□□□ -1.87
LTBQ06643 MIR3651-201ENST00000630427 90 ntBASIC3.39□□□□□ -1.87
LTBQ06643 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
LTBQ06643 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.39□□□□□ -1.87
LTBQ06643 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
LTBQ06643 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
LTBQ06643 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.38□□□□□ -1.87
LTBQ06643 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
LTBQ06643 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.38□□□□□ -1.87
LTBQ06643 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LTBQ06643 CEP170P1-201ENST00000502249 4587 ntBASIC3.38□□□□□ -1.87
LTBQ06643 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LTBQ06643 RNU4-79P-201ENST00000362764 141 ntBASIC3.38□□□□□ -1.87
LTBQ06643 Y_RNA.166-201ENST00000363730 102 ntBASIC3.38□□□□□ -1.87
LTBQ06643 RNU6-996P-201ENST00000365438 107 ntBASIC3.38□□□□□ -1.87
LTBQ06643 Z98941.1-201ENST00000407764 100 ntBASIC3.38□□□□□ -1.87
LTBQ06643 RPS20P15-201ENST00000412792 311 ntBASIC3.38□□□□□ -1.87
LTBQ06643 SYF2P2-201ENST00000417620 583 ntBASIC3.38□□□□□ -1.87
LTBQ06643 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.38□□□□□ -1.87
LTBQ06643 MTCYBP8-201ENST00000422855 651 ntBASIC3.38□□□□□ -1.87
LTBQ06643 SRIP2-201ENST00000428470 166 ntBASIC3.38□□□□□ -1.87
LTBQ06643 FTH1P6-201ENST00000430768 320 ntBASIC3.38□□□□□ -1.87
LTBQ06643 ATP5JP1-201ENST00000431631 322 ntBASIC3.38□□□□□ -1.87
LTBQ06643 OR4K11P-201ENST00000431829 904 ntBASIC3.38□□□□□ -1.87
LTBQ06643 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.38□□□□□ -1.87
LTBQ06643 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LTBQ06643 AC073415.1-201ENST00000449240 153 ntBASIC3.38□□□□□ -1.87
LTBQ06643 UBE2DNL-203ENST00000474922 222 ntBASIC3.38□□□□□ -1.87
LTBQ06643 RPL32P34-201ENST00000486380 400 ntBASIC3.38□□□□□ -1.87
LTBQ06643 NIPA2P2-201ENST00000496376 1083 ntBASIC3.38□□□□□ -1.87
LTBQ06643 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.38□□□□□ -1.87
LTBQ06643 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.38□□□□□ -1.87
LTBQ06643 RNU7-30P-201ENST00000516835 62 ntBASIC3.38□□□□□ -1.87
LTBQ06643 SNORD60.2-201ENST00000516883 86 ntBASIC3.38□□□□□ -1.87
LTBQ06643 AC107953.1-201ENST00000522216 297 ntBASIC3.38□□□□□ -1.87
LTBQ06643 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.38□□□□□ -1.87
LTBQ06643 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.38□□□□□ -1.87
LTBQ06643 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.38□□□□□ -1.87
LTBQ06643 OR4K8P-201ENST00000578842 1048 ntBASIC3.38□□□□□ -1.87
LTBQ06643 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LTBQ06643 AL050343.2-201ENST00000607338 280 ntBASIC3.38□□□□□ -1.87
LTBQ06643 AC009248.2-201ENST00000619826 254 ntBASIC3.38□□□□□ -1.87
LTBQ06643 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
LTBQ06643 PABPC1P7-201ENST00000413177 1513 ntBASIC3.38□□□□□ -1.87
LTBQ06643 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.38□□□□□ -1.87
LTBQ06643 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LTBQ06643 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
LTBQ06643 MTND5P3-201ENST00000438536 1800 ntBASIC3.37□□□□□ -1.87
LTBQ06643 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
LTBQ06643 OR4G1P-203ENST00000641984 1631 ntBASIC3.37□□□□□ -1.87
LTBQ06643 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.37□□□□□ -1.87
LTBQ06643 AP004289.2-201ENST00000444413 1457 ntBASIC3.37□□□□□ -1.87
LTBQ06643 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LTBQ06643 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.37□□□□□ -1.87
LTBQ06643 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.37□□□□□ -1.87
LTBQ06643 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LTBQ06643 Y_RNA.58-201ENST00000362807 102 ntBASIC3.37□□□□□ -1.87
LTBQ06643 Y_RNA.154-201ENST00000363624 102 ntBASIC3.37□□□□□ -1.87
LTBQ06643 RNY3P1-201ENST00000365085 102 ntBASIC3.37□□□□□ -1.87
LTBQ06643 RNY3-201ENST00000365484 102 ntBASIC3.37□□□□□ -1.87
LTBQ06643 RNU4-48P-201ENST00000365559 182 ntBASIC3.37□□□□□ -1.87
LTBQ06643 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LTBQ06643 Y_RNA.490-201ENST00000384413 102 ntBASIC3.37□□□□□ -1.87
LTBQ06643 RNU6-606P-201ENST00000384721 111 ntBASIC3.37□□□□□ -1.87
LTBQ06643 AL356057.2-201ENST00000403318 432 ntBASIC3.37□□□□□ -1.87
LTBQ06643 FAT1P1-201ENST00000406588 507 ntBASIC3.37□□□□□ -1.87
LTBQ06643 AL139247.1-201ENST00000422768 325 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms