Protein–RNA interactions for Protein: P56182

RRP1, Ribosomal RNA processing protein 1 homolog A, humanhuman

Known RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1P56182 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RRP1P56182 AL831737.1-201ENST00000441288 271 ntBASIC3.81□□□□□ -1.8
RRP1P56182 KLF3P2-201ENST00000465138 268 ntBASIC3.81□□□□□ -1.8
RRP1P56182 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.81□□□□□ -1.8
RRP1P56182 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.81□□□□□ -1.8
RRP1P56182 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.81□□□□□ -1.8
RRP1P56182 CBX3P7-201ENST00000532876 502 ntBASIC3.81□□□□□ -1.8
RRP1P56182 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
RRP1P56182 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.81□□□□□ -1.8
RRP1P56182 PCMTD1P2-201ENST00000565017 355 ntBASIC3.81□□□□□ -1.8
RRP1P56182 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.81□□□□□ -1.8
RRP1P56182 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.81□□□□□ -1.8
RRP1P56182 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.81□□□□□ -1.8
RRP1P56182 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.81□□□□□ -1.8
RRP1P56182 AC136618.2-201ENST00000575091 400 ntBASIC3.81□□□□□ -1.8
RRP1P56182 AC090615.1-201ENST00000577519 154 ntBASIC3.81□□□□□ -1.8
RRP1P56182 MIR5680-201ENST00000577577 84 ntBASIC3.81□□□□□ -1.8
RRP1P56182 MIR3913-1-201ENST00000577744 102 ntBASIC3.81□□□□□ -1.8
RRP1P56182 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.81□□□□□ -1.8
RRP1P56182 AC004853.1-201ENST00000604902 698 ntBASIC3.81□□□□□ -1.8
RRP1P56182 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.81□□□□□ -1.8
RRP1P56182 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RRP1P56182 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RRP1P56182 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RRP1P56182 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.81□□□□□ -1.8
RRP1P56182 AC073544.1-201ENST00000600110 1595 ntBASIC3.8□□□□□ -1.8
RRP1P56182 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RRP1P56182 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.8□□□□□ -1.8
RRP1P56182 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.8□□□□□ -1.8
RRP1P56182 RNU6-1074P-201ENST00000383995 104 ntBASIC3.8□□□□□ -1.8
RRP1P56182 MIR181A2-201ENST00000384863 110 ntBASIC3.8□□□□□ -1.8
RRP1P56182 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RRP1P56182 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RRP1P56182 Y_RNA.582-201ENST00000391023 95 ntBASIC3.8□□□□□ -1.8
RRP1P56182 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RRP1P56182 USP9YP6-201ENST00000413550 854 ntBASIC3.8□□□□□ -1.8
RRP1P56182 RPL21P32-201ENST00000419877 477 ntBASIC3.8□□□□□ -1.8
RRP1P56182 DUTP6-201ENST00000425573 462 ntBASIC3.8□□□□□ -1.8
RRP1P56182 USP9YP18-201ENST00000425912 695 ntBASIC3.8□□□□□ -1.8
RRP1P56182 AC002381.1-201ENST00000447049 280 ntBASIC3.8□□□□□ -1.8
RRP1P56182 WASF1P1-201ENST00000447560 1131 ntBASIC3.8□□□□□ -1.8
RRP1P56182 PAXBP1P1-201ENST00000449315 447 ntBASIC3.8□□□□□ -1.8
RRP1P56182 AL359385.1-201ENST00000456509 365 ntBASIC3.8□□□□□ -1.8
RRP1P56182 AP000797.1-201ENST00000478870 387 ntBASIC3.8□□□□□ -1.8
RRP1P56182 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RRP1P56182 FAM92A1P2-202ENST00000504766 877 ntBASIC3.8□□□□□ -1.8
RRP1P56182 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.8□□□□□ -1.8
RRP1P56182 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RRP1P56182 AC093677.1-201ENST00000514414 678 ntBASIC3.8□□□□□ -1.8
RRP1P56182 RN7SKP298-201ENST00000515950 94 ntBASIC3.8□□□□□ -1.8
RRP1P56182 COX6CP8-201ENST00000522620 226 ntBASIC3.8□□□□□ -1.8
RRP1P56182 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.8□□□□□ -1.8
RRP1P56182 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.8□□□□□ -1.8
RRP1P56182 CR383656.7-201ENST00000548164 174 ntBASIC3.8□□□□□ -1.8
RRP1P56182 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.8□□□□□ -1.8
RRP1P56182 AC091489.2-201ENST00000566263 604 ntBASIC3.8□□□□□ -1.8
RRP1P56182 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.8□□□□□ -1.8
RRP1P56182 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.8□□□□□ -1.8
RRP1P56182 BBIP1P1-201ENST00000602999 279 ntBASIC3.8□□□□□ -1.8
RRP1P56182 AC090970.3-201ENST00000612566 866 ntBASIC3.8□□□□□ -1.8
RRP1P56182 AC027807.2-201ENST00000616099 408 ntBASIC3.8□□□□□ -1.8
RRP1P56182 AC092794.2-201ENST00000620933 563 ntBASIC3.8□□□□□ -1.8
RRP1P56182 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
RRP1P56182 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
RRP1P56182 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.8□□□□□ -1.8
RRP1P56182 ELF2P3-201ENST00000445099 1506 ntBASIC3.8□□□□□ -1.8
RRP1P56182 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RRP1P56182 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
RRP1P56182 RNU1-35P-201ENST00000362782 153 ntBASIC3.79□□□□□ -1.8
RRP1P56182 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.79□□□□□ -1.8
RRP1P56182 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.79□□□□□ -1.8
RRP1P56182 RNU6-1042P-201ENST00000384204 107 ntBASIC3.79□□□□□ -1.8
RRP1P56182 Y_RNA.510-201ENST00000384511 114 ntBASIC3.79□□□□□ -1.8
RRP1P56182 SNORD115-47-201ENST00000391226 86 ntBASIC3.79□□□□□ -1.8
RRP1P56182 UBA52P6-201ENST00000399822 382 ntBASIC3.79□□□□□ -1.8
RRP1P56182 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.79□□□□□ -1.8
RRP1P56182 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.79□□□□□ -1.8
RRP1P56182 AC079780.1-201ENST00000428259 207 ntBASIC3.79□□□□□ -1.8
RRP1P56182 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.79□□□□□ -1.8
RRP1P56182 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.79□□□□□ -1.8
RRP1P56182 AL162389.1-201ENST00000449233 177 ntBASIC3.79□□□□□ -1.8
RRP1P56182 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.79□□□□□ -1.8
RRP1P56182 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.79□□□□□ -1.8
RRP1P56182 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.79□□□□□ -1.8
RRP1P56182 snoU13.4-201ENST00000458916 104 ntBASIC3.79□□□□□ -1.8
RRP1P56182 SNORD42A-201ENST00000459584 64 ntBASIC3.79□□□□□ -1.8
RRP1P56182 AC091133.4-201ENST00000511142 308 ntBASIC3.79□□□□□ -1.8
RRP1P56182 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RRP1P56182 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RRP1P56182 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.79□□□□□ -1.8
RRP1P56182 ADI1P3-201ENST00000549509 470 ntBASIC3.79□□□□□ -1.8
RRP1P56182 AC124947.2-202ENST00000552735 133 ntBASIC3.79□□□□□ -1.8
RRP1P56182 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.79□□□□□ -1.8
RRP1P56182 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.79□□□□□ -1.8
RRP1P56182 AP001004.1-201ENST00000582468 324 ntBASIC3.79□□□□□ -1.8
RRP1P56182 SNORD84-203ENST00000584275 78 ntBASIC3.79□□□□□ -1.8
RRP1P56182 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.79□□□□□ -1.8
RRP1P56182 AL031176.1-201ENST00000604554 466 ntBASIC3.79□□□□□ -1.8
RRP1P56182 AC092954.2-201ENST00000609103 430 ntBASIC3.79□□□□□ -1.8
RRP1P56182 AC107871.2-201ENST00000612894 502 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms