Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 NDUFB1P2-201ENST00000449477 176 ntBASIC4.2□□□□□ -1.74
GFRA1P56159 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.2□□□□□ -1.74
GFRA1P56159 AL135752.1-201ENST00000479477 471 ntBASIC4.2□□□□□ -1.74
GFRA1P56159 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.2□□□□□ -1.74
GFRA1P56159 RN7SL346P-201ENST00000491561 294 ntBASIC4.2□□□□□ -1.74
GFRA1P56159 HMGN1P11-201ENST00000508668 303 ntBASIC4.2□□□□□ -1.74
GFRA1P56159 SNORD116.3-201ENST00000517176 78 ntBASIC4.2□□□□□ -1.74
GFRA1P56159 TRAV28-201ENST00000557548 323 ntBASIC4.2□□□□□ -1.74
GFRA1P56159 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.2□□□□□ -1.74
GFRA1P56159 AP000787.2-201ENST00000604432 568 ntBASIC4.2□□□□□ -1.74
GFRA1P56159 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.2□□□□□ -1.74
GFRA1P56159 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
GFRA1P56159 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
GFRA1P56159 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.2□□□□□ -1.74
GFRA1P56159 AL359693.1-201ENST00000614959 2407 ntBASIC4.2□□□□□ -1.74
GFRA1P56159 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.2□□□□□ -1.74
GFRA1P56159 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
GFRA1P56159 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
GFRA1P56159 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
GFRA1P56159 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
GFRA1P56159 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
GFRA1P56159 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
GFRA1P56159 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
GFRA1P56159 RNU6-600P-201ENST00000362524 99 ntBASIC4.19□□□□□ -1.74
GFRA1P56159 RNA5SP189-201ENST00000364920 115 ntBASIC4.19□□□□□ -1.74
GFRA1P56159 SNORA71.2-201ENST00000364941 134 ntBASIC4.19□□□□□ -1.74
GFRA1P56159 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
GFRA1P56159 RNU6-842P-201ENST00000384269 107 ntBASIC4.19□□□□□ -1.74
GFRA1P56159 RNY1P14-201ENST00000384426 108 ntBASIC4.19□□□□□ -1.74
GFRA1P56159 Z98745.1-201ENST00000402553 494 ntBASIC4.19□□□□□ -1.74
GFRA1P56159 RNU4-6P-201ENST00000410804 122 ntBASIC4.19□□□□□ -1.74
GFRA1P56159 RNU6-55P-201ENST00000411092 107 ntBASIC4.19□□□□□ -1.74
GFRA1P56159 Y_RNA.623-201ENST00000411128 95 ntBASIC4.19□□□□□ -1.74
GFRA1P56159 AL096701.2-201ENST00000416920 238 ntBASIC4.19□□□□□ -1.74
GFRA1P56159 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.19□□□□□ -1.74
GFRA1P56159 AC008267.5-201ENST00000424928 265 ntBASIC4.19□□□□□ -1.74
GFRA1P56159 RSL24D1P6-201ENST00000426934 401 ntBASIC4.19□□□□□ -1.74
GFRA1P56159 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.19□□□□□ -1.74
GFRA1P56159 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
GFRA1P56159 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.19□□□□□ -1.74
GFRA1P56159 AL162591.2-201ENST00000449634 317 ntBASIC4.19□□□□□ -1.74
GFRA1P56159 BTF3P15-201ENST00000455606 336 ntBASIC4.19□□□□□ -1.74
GFRA1P56159 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.19□□□□□ -1.74
GFRA1P56159 RN7SL459P-201ENST00000481078 302 ntBASIC4.19□□□□□ -1.74
GFRA1P56159 RPL31P13-201ENST00000484151 370 ntBASIC4.19□□□□□ -1.74
GFRA1P56159 NIP7P2-201ENST00000485801 544 ntBASIC4.19□□□□□ -1.74
GFRA1P56159 AC020890.1-201ENST00000491837 504 ntBASIC4.19□□□□□ -1.74
GFRA1P56159 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.19□□□□□ -1.74
GFRA1P56159 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.19□□□□□ -1.74
GFRA1P56159 RN7SKP92-201ENST00000517266 244 ntBASIC4.19□□□□□ -1.74
GFRA1P56159 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.19□□□□□ -1.74
GFRA1P56159 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.19□□□□□ -1.74
GFRA1P56159 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.19□□□□□ -1.74
GFRA1P56159 AC008745.1-201ENST00000604064 271 ntBASIC4.19□□□□□ -1.74
GFRA1P56159 AC106900.2-201ENST00000604994 317 ntBASIC4.19□□□□□ -1.74
GFRA1P56159 AC123912.5-201ENST00000605470 343 ntBASIC4.19□□□□□ -1.74
GFRA1P56159 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.19□□□□□ -1.74
GFRA1P56159 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
GFRA1P56159 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
GFRA1P56159 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
GFRA1P56159 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.19□□□□□ -1.74
GFRA1P56159 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
GFRA1P56159 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.19□□□□□ -1.74
GFRA1P56159 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
GFRA1P56159 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
GFRA1P56159 NEAT1-202ENST00000501122 22743 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
GFRA1P56159 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
GFRA1P56159 RNU6-1309P-201ENST00000363305 108 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 SNORD14B-201ENST00000364533 90 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 RNA5SP167-201ENST00000365461 116 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 RNU6-1105P-201ENST00000384774 107 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 AL022722.2-201ENST00000402519 180 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 RNU6-985P-201ENST00000410182 104 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 FAR2P2-201ENST00000413041 594 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.18□□□□□ -1.74
GFRA1P56159 AL592148.1-201ENST00000413568 445 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 AL358176.2-201ENST00000425769 204 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 RPL23AP1-201ENST00000428990 471 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 AL627311.1-201ENST00000431514 115 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 FTH1P25-201ENST00000447665 469 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 CECR9-201ENST00000453421 199 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.18□□□□□ -1.74
GFRA1P56159 RPL12P25-201ENST00000455592 494 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 AL583843.1-201ENST00000456070 346 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 SCARNA10-201ENST00000459255 330 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 AP000873.1-201ENST00000463987 400 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 AC006463.2-201ENST00000473326 348 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 AC015911.1-201ENST00000495111 156 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.18□□□□□ -1.74
GFRA1P56159 AC005921.1-201ENST00000510589 286 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.18□□□□□ -1.74
GFRA1P56159 AC113155.1-201ENST00000511141 769 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 ACA59.1-201ENST00000515966 143 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 RNU6-1137P-201ENST00000517073 99 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
GFRA1P56159 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.18□□□□□ -1.74
GFRA1P56159 AC025755.1-201ENST00000521306 278 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 MIR5096-201ENST00000583713 70 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms