Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 snoU13.8-201ENST00000458890 104 ntBASIC1.48□□□□□ -2.17
RPL28P46779 AC080013.2-201ENST00000460866 323 ntBASIC1.48□□□□□ -2.17
RPL28P46779 AC128713.1-201ENST00000471495 306 ntBASIC1.48□□□□□ -2.17
RPL28P46779 RPL23AP49-201ENST00000492925 468 ntBASIC1.48□□□□□ -2.17
RPL28P46779 AC022493.1-201ENST00000492984 337 ntBASIC1.48□□□□□ -2.17
RPL28P46779 RPS27AP10-201ENST00000496103 208 ntBASIC1.48□□□□□ -2.17
RPL28P46779 MTCO2P9-201ENST00000503214 694 ntBASIC1.48□□□□□ -2.17
RPL28P46779 AC069306.1-201ENST00000507006 843 ntBASIC1.48□□□□□ -2.17
RPL28P46779 RNA5SP148-201ENST00000516527 94 ntBASIC1.48□□□□□ -2.17
RPL28P46779 RNU6-714P-201ENST00000516963 103 ntBASIC1.48□□□□□ -2.17
RPL28P46779 RNU6-334P-201ENST00000517072 102 ntBASIC1.48□□□□□ -2.17
RPL28P46779 SCARNA3-201ENST00000517097 143 ntBASIC1.48□□□□□ -2.17
RPL28P46779 RNU6-840P-201ENST00000517275 65 ntBASIC1.48□□□□□ -2.17
RPL28P46779 RPL7P20-201ENST00000520308 745 ntBASIC1.48□□□□□ -2.17
RPL28P46779 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.48□□□□□ -2.17
RPL28P46779 MTCO3P15-201ENST00000526563 574 ntBASIC1.48□□□□□ -2.17
RPL28P46779 UBTFL10-201ENST00000528532 562 ntBASIC1.48□□□□□ -2.17
RPL28P46779 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
RPL28P46779 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.48□□□□□ -2.17
RPL28P46779 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.48□□□□□ -2.17
RPL28P46779 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.48□□□□□ -2.17
RPL28P46779 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.48□□□□□ -2.17
RPL28P46779 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.48□□□□□ -2.17
RPL28P46779 AL391813.1-201ENST00000603098 260 ntBASIC1.48□□□□□ -2.17
RPL28P46779 AL021997.1-201ENST00000605757 193 ntBASIC1.48□□□□□ -2.17
RPL28P46779 AC107214.2-201ENST00000608204 634 ntBASIC1.48□□□□□ -2.17
RPL28P46779 AL138478.1-201ENST00000612252 832 ntBASIC1.48□□□□□ -2.17
RPL28P46779 AC243773.3-201ENST00000613270 256 ntBASIC1.48□□□□□ -2.17
RPL28P46779 AL357080.1-201ENST00000617394 239 ntBASIC1.48□□□□□ -2.17
RPL28P46779 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.48□□□□□ -2.17
RPL28P46779 MIR6766-201ENST00000622641 72 ntBASIC1.48□□□□□ -2.17
RPL28P46779 AC025034.2-201ENST00000623264 286 ntBASIC1.48□□□□□ -2.17
RPL28P46779 AC109454.4-201ENST00000623411 649 ntBASIC1.48□□□□□ -2.17
RPL28P46779 SCARNA15.3-201ENST00000626315 122 ntBASIC1.48□□□□□ -2.17
RPL28P46779 SCARNA4.1-201ENST00000628597 123 ntBASIC1.48□□□□□ -2.17
RPL28P46779 CTSLP2-204ENST00000629029 392 ntBASIC1.48□□□□□ -2.17
RPL28P46779 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
RPL28P46779 AL136360.1-201ENST00000503377 1900 ntBASIC1.48□□□□□ -2.17
RPL28P46779 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
RPL28P46779 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
RPL28P46779 ELF2P3-201ENST00000445099 1506 ntBASIC1.47□□□□□ -2.17
RPL28P46779 HSPA8P4-201ENST00000511877 1920 ntBASIC1.47□□□□□ -2.17
RPL28P46779 RNU6-1078P-201ENST00000364522 103 ntBASIC1.47□□□□□ -2.17
RPL28P46779 RNU6-343P-201ENST00000364709 104 ntBASIC1.47□□□□□ -2.17
RPL28P46779 MIR634-201ENST00000385208 97 ntBASIC1.47□□□□□ -2.17
RPL28P46779 CCNG1P1-201ENST00000406783 885 ntBASIC1.47□□□□□ -2.17
RPL28P46779 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.47□□□□□ -2.17
RPL28P46779 AL356379.1-201ENST00000414105 126 ntBASIC1.47□□□□□ -2.17
RPL28P46779 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.47□□□□□ -2.17
RPL28P46779 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.47□□□□□ -2.17
RPL28P46779 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.47□□□□□ -2.17
RPL28P46779 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.47□□□□□ -2.17
RPL28P46779 AC003685.2-201ENST00000422795 395 ntBASIC1.47□□□□□ -2.17
RPL28P46779 MTCO2P1-201ENST00000424648 477 ntBASIC1.47□□□□□ -2.17
RPL28P46779 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.47□□□□□ -2.17
RPL28P46779 ZYG11AP1-201ENST00000430329 837 ntBASIC1.47□□□□□ -2.17
RPL28P46779 FCF1P1-201ENST00000432690 571 ntBASIC1.47□□□□□ -2.17
RPL28P46779 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.47□□□□□ -2.17
RPL28P46779 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
RPL28P46779 AC002381.1-201ENST00000447049 280 ntBASIC1.47□□□□□ -2.17
RPL28P46779 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.47□□□□□ -2.17
RPL28P46779 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.47□□□□□ -2.17
RPL28P46779 TRBV1-201ENST00000476502 284 ntBASIC1.47□□□□□ -2.17
RPL28P46779 AC072039.1-201ENST00000477611 581 ntBASIC1.47□□□□□ -2.17
RPL28P46779 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
RPL28P46779 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.47□□□□□ -2.17
RPL28P46779 AC234781.5-201ENST00000508429 271 ntBASIC1.47□□□□□ -2.17
RPL28P46779 AC008413.1-201ENST00000511864 177 ntBASIC1.47□□□□□ -2.17
RPL28P46779 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.47□□□□□ -2.17
RPL28P46779 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.47□□□□□ -2.17
RPL28P46779 RNA5SP364-201ENST00000516938 78 ntBASIC1.47□□□□□ -2.17
RPL28P46779 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.47□□□□□ -2.17
RPL28P46779 OR8K2P-201ENST00000524645 927 ntBASIC1.47□□□□□ -2.17
RPL28P46779 AP002770.2-201ENST00000543613 532 ntBASIC1.47□□□□□ -2.17
RPL28P46779 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.47□□□□□ -2.17
RPL28P46779 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.47□□□□□ -2.17
RPL28P46779 VN1R87P-201ENST00000596706 487 ntBASIC1.47□□□□□ -2.17
RPL28P46779 AC024257.5-201ENST00000612739 531 ntBASIC1.47□□□□□ -2.17
RPL28P46779 AC010678.1-201ENST00000614118 713 ntBASIC1.47□□□□□ -2.17
RPL28P46779 uc_338.20-201ENST00000621563 178 ntBASIC1.47□□□□□ -2.17
RPL28P46779 AL445264.1-201ENST00000621719 171 ntBASIC1.47□□□□□ -2.17
RPL28P46779 DUXAP9-208ENST00000622815 614 ntBASIC1.47□□□□□ -2.17
RPL28P46779 AC073592.7-201ENST00000623659 507 ntBASIC1.47□□□□□ -2.17
RPL28P46779 AL160394.1-201ENST00000624765 724 ntBASIC1.47□□□□□ -2.17
RPL28P46779 U2.21-201ENST00000637295 81 ntBASIC1.47□□□□□ -2.17
RPL28P46779 CDR1-202ENST00000625883 1485 ntBASIC1.47□□□□□ -2.17
RPL28P46779 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
RPL28P46779 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
RPL28P46779 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
RPL28P46779 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
RPL28P46779 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.47□□□□□ -2.17
RPL28P46779 KPNA2P1-201ENST00000458289 1591 ntBASIC1.47□□□□□ -2.17
RPL28P46779 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.17
RPL28P46779 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.46□□□□□ -2.18
RPL28P46779 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.46□□□□□ -2.18
RPL28P46779 RNU6-236P-201ENST00000363886 106 ntBASIC1.46□□□□□ -2.18
RPL28P46779 RNA5SP125-201ENST00000364843 120 ntBASIC1.46□□□□□ -2.18
RPL28P46779 U3.40-201ENST00000408706 208 ntBASIC1.46□□□□□ -2.18
RPL28P46779 NDUFS5P4-201ENST00000412983 318 ntBASIC1.46□□□□□ -2.18
RPL28P46779 USP9YP22-201ENST00000438971 294 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms