Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC006338.1-201ENST00000618453 749 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL15A1P39059 RPS4XP5-202ENST00000449995 1334 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COL15A1P39059 RIOK3P1-201ENST00000418778 1528 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL15A1P39059 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
COL15A1P39059 AC007496.3-201ENST00000624987 3443 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL15A1P39059 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COL15A1P39059 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL15A1P39059 AC093536.2-201ENST00000565257 1406 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.02□□□□□ -1.77
COL15A1P39059 RNU6-181P-201ENST00000363225 107 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 RNY3P13-201ENST00000365542 102 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 RNU6-432P-201ENST00000384196 109 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
COL15A1P39059 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COL15A1P39059 RNU6-712P-201ENST00000410558 100 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.02□□□□□ -1.77
COL15A1P39059 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.02□□□□□ -1.77
COL15A1P39059 TIMM9P3-201ENST00000428659 274 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 RPL21P112-201ENST00000434403 463 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.02□□□□□ -1.77
COL15A1P39059 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.02□□□□□ -1.77
COL15A1P39059 RNU7-59P-201ENST00000459101 61 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 MTCO2P29-201ENST00000465212 189 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 RNU6-445P-201ENST00000516949 107 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 AP001893.2-201ENST00000526949 202 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.02□□□□□ -1.77
COL15A1P39059 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.02□□□□□ -1.77
COL15A1P39059 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.02□□□□□ -1.77
COL15A1P39059 H3F3AP1-201ENST00000559984 334 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.02□□□□□ -1.77
COL15A1P39059 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.02□□□□□ -1.77
COL15A1P39059 OR4K8P-201ENST00000578842 1048 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.02□□□□□ -1.77
COL15A1P39059 AC006254.3-201ENST00000603353 884 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 AC008277.2-201ENST00000605196 797 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.02□□□□□ -1.77
COL15A1P39059 AL359880.1-201ENST00000621879 266 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 AC007998.5-201ENST00000622938 237 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 AC099506.2-201ENST00000623074 221 ntBASIC4.02□□□□□ -1.77
COL15A1P39059 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL15A1P39059 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL15A1P39059 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
COL15A1P39059 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.01□□□□□ -1.77
COL15A1P39059 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL15A1P39059 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL15A1P39059 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL15A1P39059 Y_RNA.9-201ENST00000362354 101 ntBASIC4.01□□□□□ -1.77
COL15A1P39059 RNA5SP189-201ENST00000364920 115 ntBASIC4.01□□□□□ -1.77
COL15A1P39059 Y_RNA.372-201ENST00000365599 102 ntBASIC4.01□□□□□ -1.77
COL15A1P39059 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
COL15A1P39059 RNU6-456P-201ENST00000384493 107 ntBASIC4.01□□□□□ -1.77
COL15A1P39059 SNORD115-47-201ENST00000391226 86 ntBASIC4.01□□□□□ -1.77
COL15A1P39059 BEND7P1-201ENST00000422058 457 ntBASIC4.01□□□□□ -1.77
COL15A1P39059 AL596276.1-201ENST00000434465 418 ntBASIC4.01□□□□□ -1.77
COL15A1P39059 RPL35AP22-201ENST00000436855 335 ntBASIC4.01□□□□□ -1.77
COL15A1P39059 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.01□□□□□ -1.77
COL15A1P39059 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.01□□□□□ -1.77
COL15A1P39059 AC079382.1-201ENST00000493346 557 ntBASIC4.01□□□□□ -1.77
COL15A1P39059 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.01□□□□□ -1.77
COL15A1P39059 AC091826.1-201ENST00000514065 313 ntBASIC4.01□□□□□ -1.77
COL15A1P39059 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.01□□□□□ -1.77
COL15A1P39059 RNA5SP337-201ENST00000517007 109 ntBASIC4.01□□□□□ -1.77
COL15A1P39059 AC009812.2-201ENST00000517657 457 ntBASIC4.01□□□□□ -1.77
COL15A1P39059 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.01□□□□□ -1.77
COL15A1P39059 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.01□□□□□ -1.77
COL15A1P39059 AP000857.1-201ENST00000532151 543 ntBASIC4.01□□□□□ -1.77
COL15A1P39059 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.01□□□□□ -1.77
COL15A1P39059 SUB1P2-201ENST00000556401 297 ntBASIC4.01□□□□□ -1.77
COL15A1P39059 AC234778.2-201ENST00000566241 354 ntBASIC4.01□□□□□ -1.77
COL15A1P39059 MIR3167-201ENST00000579623 85 ntBASIC4.01□□□□□ -1.77
COL15A1P39059 AC010928.3-201ENST00000587712 541 ntBASIC4.01□□□□□ -1.77
COL15A1P39059 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.01□□□□□ -1.77
COL15A1P39059 AC012669.1-201ENST00000603209 283 ntBASIC4.01□□□□□ -1.77
COL15A1P39059 AC012507.3-201ENST00000603556 477 ntBASIC4.01□□□□□ -1.77
COL15A1P39059 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.01□□□□□ -1.77
COL15A1P39059 AC245517.5-201ENST00000611529 162 ntBASIC4.01□□□□□ -1.77
COL15A1P39059 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.01□□□□□ -1.77
COL15A1P39059 uc_338.12-201ENST00000616344 181 ntBASIC4.01□□□□□ -1.77
COL15A1P39059 AL138713.1-201ENST00000624026 2130 ntBASIC4.01□□□□□ -1.77
COL15A1P39059 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.01□□□□□ -1.77
COL15A1P39059 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL15A1P39059 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.01□□□□□ -1.77
COL15A1P39059 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
COL15A1P39059 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4□□□□□ -1.77
COL15A1P39059 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
COL15A1P39059 AL365361.1-201ENST00000566942 3481 ntBASIC4□□□□□ -1.77
COL15A1P39059 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
COL15A1P39059 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL15A1P39059 OR1S2-201ENST00000302592 978 ntBASIC4□□□□□ -1.77
COL15A1P39059 Y_RNA.248-201ENST00000364501 109 ntBASIC4□□□□□ -1.77
COL15A1P39059 RNU6-282P-201ENST00000365357 103 ntBASIC4□□□□□ -1.77
COL15A1P39059 RNU6-637P-201ENST00000384050 107 ntBASIC4□□□□□ -1.77
COL15A1P39059 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4□□□□□ -1.77
COL15A1P39059 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4□□□□□ -1.77
COL15A1P39059 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4□□□□□ -1.77
COL15A1P39059 MTCO2P11-201ENST00000431069 680 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms