Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 RN7SKP289-201ENST00000517244 295 ntBASIC6.54□□□□□ -1.36
CD44P16070 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.54□□□□□ -1.36
CD44P16070 MIR4420-201ENST00000583944 77 ntBASIC6.54□□□□□ -1.36
CD44P16070 AL356157.2-201ENST00000605122 111 ntBASIC6.54□□□□□ -1.36
CD44P16070 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.54□□□□□ -1.36
CD44P16070 AC027309.3-201ENST00000623419 351 ntBASIC6.54□□□□□ -1.36
CD44P16070 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.54□□□□□ -1.36
CD44P16070 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD44P16070 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD44P16070 AL022323.4-201ENST00000623980 13120 ntBASIC6.54□□□□□ -1.36
CD44P16070 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD44P16070 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.54□□□□□ -1.36
CD44P16070 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CD44P16070 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.54□□□□□ -1.36
CD44P16070 AC140479.2-201ENST00000421567 3130 ntBASIC6.54□□□□□ -1.36
CD44P16070 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.54□□□□□ -1.36
CD44P16070 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CD44P16070 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.53□□□□□ -1.36
CD44P16070 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CD44P16070 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CD44P16070 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CD44P16070 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CD44P16070 RNU6-1264P-201ENST00000383891 107 ntBASIC6.53□□□□□ -1.36
CD44P16070 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CD44P16070 AC005042.1-201ENST00000393397 800 ntBASIC6.53□□□□□ -1.36
CD44P16070 GPM6BP3-201ENST00000442797 145 ntBASIC6.53□□□□□ -1.36
CD44P16070 AL356121.1-201ENST00000442911 156 ntBASIC6.53□□□□□ -1.36
CD44P16070 AL078601.1-201ENST00000444542 271 ntBASIC6.53□□□□□ -1.36
CD44P16070 AC009237.8-201ENST00000445492 379 ntBASIC6.53□□□□□ -1.36
CD44P16070 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.53□□□□□ -1.36
CD44P16070 KF459542.1-201ENST00000450908 553 ntBASIC6.53□□□□□ -1.36
CD44P16070 AC005017.1-201ENST00000482002 490 ntBASIC6.53□□□□□ -1.36
CD44P16070 COX6CP6-201ENST00000490840 228 ntBASIC6.53□□□□□ -1.36
CD44P16070 AP002453.1-201ENST00000492327 668 ntBASIC6.53□□□□□ -1.36
CD44P16070 MRPS5P3-201ENST00000515577 166 ntBASIC6.53□□□□□ -1.36
CD44P16070 RN7SKP35-201ENST00000517210 151 ntBASIC6.53□□□□□ -1.36
CD44P16070 RNU1-104P-201ENST00000517280 175 ntBASIC6.53□□□□□ -1.36
CD44P16070 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CD44P16070 TXNP4-201ENST00000575018 310 ntBASIC6.53□□□□□ -1.36
CD44P16070 MIR5009-201ENST00000578736 100 ntBASIC6.53□□□□□ -1.36
CD44P16070 uc_338.31-201ENST00000615595 186 ntBASIC6.53□□□□□ -1.36
CD44P16070 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC6.53□□□□□ -1.36
CD44P16070 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.53□□□□□ -1.36
CD44P16070 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CD44P16070 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CD44P16070 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
CD44P16070 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
CD44P16070 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
CD44P16070 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC6.52□□□□□ -1.37
CD44P16070 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CD44P16070 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CD44P16070 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CD44P16070 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.52□□□□□ -1.37
CD44P16070 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
CD44P16070 MIR191-201ENST00000384873 92 ntBASIC6.52□□□□□ -1.37
CD44P16070 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.52□□□□□ -1.37
CD44P16070 RPS20P14-201ENST00000412545 360 ntBASIC6.52□□□□□ -1.37
CD44P16070 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.52□□□□□ -1.37
CD44P16070 AC006539.1-201ENST00000481419 501 ntBASIC6.52□□□□□ -1.37
CD44P16070 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.52□□□□□ -1.37
CD44P16070 RN7SL362P-201ENST00000494228 267 ntBASIC6.52□□□□□ -1.37
CD44P16070 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC6.52□□□□□ -1.37
CD44P16070 IGKV3D-25-201ENST00000519599 235 ntBASIC6.52□□□□□ -1.37
CD44P16070 AC141557.1-201ENST00000540982 400 ntBASIC6.52□□□□□ -1.37
CD44P16070 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.52□□□□□ -1.37
CD44P16070 AL137843.1-201ENST00000605078 385 ntBASIC6.52□□□□□ -1.37
CD44P16070 AL133481.2-203ENST00000607558 139 ntBASIC6.52□□□□□ -1.37
CD44P16070 AL136228.1-201ENST00000622221 319 ntBASIC6.52□□□□□ -1.37
CD44P16070 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.52□□□□□ -1.37
CD44P16070 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.52□□□□□ -1.37
CD44P16070 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
CD44P16070 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.52□□□□□ -1.37
CD44P16070 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CD44P16070 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CD44P16070 IL33-202ENST00000417746 2327 ntTSL 2 BASIC6.51□□□□□ -1.37
CD44P16070 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CD44P16070 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CD44P16070 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CD44P16070 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CD44P16070 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.51□□□□□ -1.37
CD44P16070 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CD44P16070 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CD44P16070 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CD44P16070 AC004076.2-201ENST00000620532 3323 ntBASIC6.51□□□□□ -1.37
CD44P16070 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CD44P16070 SELENOWP1-201ENST00000322792 252 ntBASIC6.51□□□□□ -1.37
CD44P16070 RNU6-727P-201ENST00000363592 107 ntBASIC6.51□□□□□ -1.37
CD44P16070 SNORA36A-201ENST00000384221 132 ntBASIC6.51□□□□□ -1.37
CD44P16070 MIR130B-202ENST00000385018 82 ntBASIC6.51□□□□□ -1.37
CD44P16070 RNU6-1245P-201ENST00000411130 106 ntBASIC6.51□□□□□ -1.37
CD44P16070 THEM7P-201ENST00000419556 672 ntBASIC6.51□□□□□ -1.37
CD44P16070 TDGF1P1-201ENST00000445734 527 ntBASIC6.51□□□□□ -1.37
CD44P16070 AP000705.1-201ENST00000454567 350 ntBASIC6.51□□□□□ -1.37
CD44P16070 AC090515.1-201ENST00000465295 476 ntBASIC6.51□□□□□ -1.37
CD44P16070 AC098818.1-201ENST00000478593 252 ntBASIC6.51□□□□□ -1.37
CD44P16070 RN7SL284P-201ENST00000498823 275 ntBASIC6.51□□□□□ -1.37
CD44P16070 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.51□□□□□ -1.37
CD44P16070 SNORA43.2-201ENST00000516652 128 ntBASIC6.51□□□□□ -1.37
CD44P16070 RNU6-572P-201ENST00000516724 80 ntBASIC6.51□□□□□ -1.37
CD44P16070 AC136777.2-201ENST00000522979 358 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms