Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.8□□□□□ -1.64
NID1P14543 MIR4436B2-201ENST00000581415 91 ntBASIC4.8□□□□□ -1.64
NID1P14543 MIR4436B1-201ENST00000583272 91 ntBASIC4.8□□□□□ -1.64
NID1P14543 MIR4282-201ENST00000583613 67 ntBASIC4.8□□□□□ -1.64
NID1P14543 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.8□□□□□ -1.64
NID1P14543 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.8□□□□□ -1.64
NID1P14543 BRDTP1-201ENST00000605735 677 ntBASIC4.8□□□□□ -1.64
NID1P14543 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.8□□□□□ -1.64
NID1P14543 AC011476.5-201ENST00000615594 130 ntBASIC4.8□□□□□ -1.64
NID1P14543 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NID1P14543 SDAD1P2-201ENST00000441308 2028 ntBASIC4.8□□□□□ -1.64
NID1P14543 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NID1P14543 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
NID1P14543 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.8□□□□□ -1.64
NID1P14543 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NID1P14543 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NID1P14543 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
NID1P14543 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NID1P14543 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NID1P14543 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
NID1P14543 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.79□□□□□ -1.64
NID1P14543 MUC2-202ENST00000613187 4845 ntBASIC4.79□□□□□ -1.64
NID1P14543 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
NID1P14543 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.79□□□□□ -1.64
NID1P14543 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
NID1P14543 RBBP8P1-201ENST00000449447 1844 ntBASIC4.79□□□□□ -1.64
NID1P14543 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NID1P14543 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NID1P14543 RNU6-37P-201ENST00000362692 107 ntBASIC4.79□□□□□ -1.64
NID1P14543 RNU6-11P-201ENST00000364234 107 ntBASIC4.79□□□□□ -1.64
NID1P14543 RNU6-7-201ENST00000364784 107 ntBASIC4.79□□□□□ -1.64
NID1P14543 RNU6-8-201ENST00000365467 107 ntBASIC4.79□□□□□ -1.64
NID1P14543 RNU6-827P-201ENST00000365553 106 ntBASIC4.79□□□□□ -1.64
NID1P14543 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NID1P14543 RNU6-25P-201ENST00000383873 107 ntBASIC4.79□□□□□ -1.64
NID1P14543 RNU6-1-201ENST00000383898 107 ntBASIC4.79□□□□□ -1.64
NID1P14543 RNU6-36P-201ENST00000384172 107 ntBASIC4.79□□□□□ -1.64
NID1P14543 RNU6-4P-201ENST00000384205 107 ntBASIC4.79□□□□□ -1.64
NID1P14543 RNU6-5P-201ENST00000384238 107 ntBASIC4.79□□□□□ -1.64
NID1P14543 RNU6-3P-201ENST00000384314 107 ntBASIC4.79□□□□□ -1.64
NID1P14543 RNU6-16P-201ENST00000384385 107 ntBASIC4.79□□□□□ -1.64
NID1P14543 SNORA67-201ENST00000384423 137 ntBASIC4.79□□□□□ -1.64
NID1P14543 RNU6-15P-201ENST00000384534 107 ntBASIC4.79□□□□□ -1.64
NID1P14543 RNU6-2-201ENST00000384627 107 ntBASIC4.79□□□□□ -1.64
NID1P14543 RNU6-29P-201ENST00000384637 107 ntBASIC4.79□□□□□ -1.64
NID1P14543 RNU6-9-201ENST00000384776 107 ntBASIC4.79□□□□□ -1.64
NID1P14543 AC108075.1-201ENST00000424692 529 ntBASIC4.79□□□□□ -1.64
NID1P14543 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.79□□□□□ -1.64
NID1P14543 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.79□□□□□ -1.64
NID1P14543 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.79□□□□□ -1.64
NID1P14543 RPS29P10-201ENST00000439197 166 ntBASIC4.79□□□□□ -1.64
NID1P14543 Y_RNA.638-201ENST00000459374 113 ntBASIC4.79□□□□□ -1.64
NID1P14543 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.79□□□□□ -1.64
NID1P14543 RPL37P6-202ENST00000464216 403 ntBASIC4.79□□□□□ -1.64
NID1P14543 AC034236.1-201ENST00000469891 373 ntBASIC4.79□□□□□ -1.64
NID1P14543 AC010683.1-201ENST00000473673 378 ntBASIC4.79□□□□□ -1.64
NID1P14543 RPL23AP65-201ENST00000475608 468 ntBASIC4.79□□□□□ -1.64
NID1P14543 RPL7AP6-201ENST00000477943 801 ntBASIC4.79□□□□□ -1.64
NID1P14543 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.79□□□□□ -1.64
NID1P14543 AC074133.1-201ENST00000515696 183 ntBASIC4.79□□□□□ -1.64
NID1P14543 RNU7-175P-201ENST00000515915 61 ntBASIC4.79□□□□□ -1.64
NID1P14543 FTH1P11-201ENST00000517577 551 ntBASIC4.79□□□□□ -1.64
NID1P14543 H3F3AP1-201ENST00000559984 334 ntBASIC4.79□□□□□ -1.64
NID1P14543 RNU6-6P-201ENST00000606623 107 ntBASIC4.79□□□□□ -1.64
NID1P14543 SNORD113-5-201ENST00000607261 78 ntBASIC4.79□□□□□ -1.64
NID1P14543 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
NID1P14543 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
NID1P14543 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
NID1P14543 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
NID1P14543 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NID1P14543 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NID1P14543 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
NID1P14543 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.78□□□□□ -1.64
NID1P14543 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NID1P14543 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NID1P14543 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NID1P14543 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NID1P14543 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NID1P14543 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NID1P14543 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NID1P14543 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
NID1P14543 SNORA25.1-201ENST00000362326 128 ntBASIC4.78□□□□□ -1.64
NID1P14543 Y_RNA.275-201ENST00000364726 110 ntBASIC4.78□□□□□ -1.64
NID1P14543 RNU6-923P-201ENST00000364753 107 ntBASIC4.78□□□□□ -1.64
NID1P14543 RNA5SP90-201ENST00000364801 99 ntBASIC4.78□□□□□ -1.64
NID1P14543 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NID1P14543 RN7SKP213-201ENST00000410746 298 ntBASIC4.78□□□□□ -1.64
NID1P14543 RNU6-651P-201ENST00000411040 105 ntBASIC4.78□□□□□ -1.64
NID1P14543 AL772161.1-201ENST00000439130 476 ntBASIC4.78□□□□□ -1.64
NID1P14543 MRPL48P1-201ENST00000445390 636 ntBASIC4.78□□□□□ -1.64
NID1P14543 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.78□□□□□ -1.64
NID1P14543 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.78□□□□□ -1.64
NID1P14543 U8.22-201ENST00000459141 133 ntBASIC4.78□□□□□ -1.64
NID1P14543 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NID1P14543 AC022493.1-201ENST00000492984 337 ntBASIC4.78□□□□□ -1.64
NID1P14543 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.78□□□□□ -1.64
NID1P14543 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.78□□□□□ -1.64
NID1P14543 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.78□□□□□ -1.64
NID1P14543 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.78□□□□□ -1.64
NID1P14543 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms