Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HOXC6P09630 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HOXC6P09630 AC097714.1-201ENST00000511272 1647 ntBASIC3.6□□□□□ -1.83
HOXC6P09630 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HOXC6P09630 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
HOXC6P09630 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.6□□□□□ -1.83
HOXC6P09630 MIR30E-201ENST00000362104 92 ntBASIC3.6□□□□□ -1.83
HOXC6P09630 RNU4-1-201ENST00000363925 141 ntBASIC3.6□□□□□ -1.83
HOXC6P09630 FGF7P8-201ENST00000402994 292 ntBASIC3.6□□□□□ -1.83
HOXC6P09630 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXC6P09630 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXC6P09630 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXC6P09630 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXC6P09630 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXC6P09630 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.6□□□□□ -1.83
HOXC6P09630 USP9YP15-201ENST00000442391 422 ntBASIC3.6□□□□□ -1.83
HOXC6P09630 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXC6P09630 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXC6P09630 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXC6P09630 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXC6P09630 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.6□□□□□ -1.83
HOXC6P09630 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXC6P09630 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXC6P09630 TXNP6-201ENST00000510190 310 ntBASIC3.6□□□□□ -1.83
HOXC6P09630 NDUFB4P9-201ENST00000511646 388 ntBASIC3.6□□□□□ -1.83
HOXC6P09630 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXC6P09630 RNU6-358P-201ENST00000516564 75 ntBASIC3.6□□□□□ -1.83
HOXC6P09630 SNORA20.3-201ENST00000516880 132 ntBASIC3.6□□□□□ -1.83
HOXC6P09630 RN7SKP234-201ENST00000517173 224 ntBASIC3.6□□□□□ -1.83
HOXC6P09630 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXC6P09630 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXC6P09630 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXC6P09630 AC109635.3-201ENST00000529536 185 ntBASIC3.6□□□□□ -1.83
HOXC6P09630 SUB1P2-201ENST00000556401 297 ntBASIC3.6□□□□□ -1.83
HOXC6P09630 TGIF1P1-201ENST00000558095 802 ntBASIC3.6□□□□□ -1.83
HOXC6P09630 AL356432.3-201ENST00000568952 465 ntBASIC3.6□□□□□ -1.83
HOXC6P09630 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.6□□□□□ -1.83
HOXC6P09630 UBE2L4-201ENST00000587688 464 ntBASIC3.6□□□□□ -1.83
HOXC6P09630 AC012507.3-201ENST00000603556 477 ntBASIC3.6□□□□□ -1.83
HOXC6P09630 RPL23AP92-201ENST00000603609 255 ntBASIC3.6□□□□□ -1.83
HOXC6P09630 AC011468.4-201ENST00000603942 409 ntBASIC3.6□□□□□ -1.83
HOXC6P09630 AL136363.1-201ENST00000605349 337 ntBASIC3.6□□□□□ -1.83
HOXC6P09630 AC121334.2-201ENST00000605387 271 ntBASIC3.6□□□□□ -1.83
HOXC6P09630 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.6□□□□□ -1.83
HOXC6P09630 AC017083.3-201ENST00000609955 700 ntBASIC3.6□□□□□ -1.83
HOXC6P09630 AL020991.1-201ENST00000612314 373 ntBASIC3.6□□□□□ -1.83
HOXC6P09630 AC104260.1-201ENST00000616660 539 ntBASIC3.6□□□□□ -1.83
HOXC6P09630 AL158801.5-201ENST00000623123 465 ntBASIC3.6□□□□□ -1.83
HOXC6P09630 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.6□□□□□ -1.83
HOXC6P09630 AC004944.1-201ENST00000517807 3059 ntBASIC3.6□□□□□ -1.83
HOXC6P09630 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HOXC6P09630 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.59□□□□□ -1.83
HOXC6P09630 AC092447.10-201ENST00000620607 1652 ntBASIC3.59□□□□□ -1.83
HOXC6P09630 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HOXC6P09630 RNU6-797P-201ENST00000363101 109 ntBASIC3.59□□□□□ -1.83
HOXC6P09630 Y_RNA.234-201ENST00000364409 97 ntBASIC3.59□□□□□ -1.83
HOXC6P09630 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
HOXC6P09630 RNU6-878P-201ENST00000384578 110 ntBASIC3.59□□□□□ -1.83
HOXC6P09630 AL356968.1-201ENST00000416622 474 ntBASIC3.59□□□□□ -1.83
HOXC6P09630 RPS12P23-201ENST00000419579 400 ntBASIC3.59□□□□□ -1.83
HOXC6P09630 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXC6P09630 AL049734.2-201ENST00000441066 616 ntBASIC3.59□□□□□ -1.83
HOXC6P09630 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXC6P09630 FTH1P25-201ENST00000447665 469 ntBASIC3.59□□□□□ -1.83
HOXC6P09630 MTND3P10-201ENST00000450967 341 ntBASIC3.59□□□□□ -1.83
HOXC6P09630 AC023194.1-201ENST00000493084 308 ntBASIC3.59□□□□□ -1.83
HOXC6P09630 RNU6-528P-201ENST00000516926 100 ntBASIC3.59□□□□□ -1.83
HOXC6P09630 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXC6P09630 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXC6P09630 IGKV2D-36-201ENST00000518643 226 ntBASIC3.59□□□□□ -1.83
HOXC6P09630 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXC6P09630 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.59□□□□□ -1.83
HOXC6P09630 AP000907.2-201ENST00000530827 353 ntBASIC3.59□□□□□ -1.83
HOXC6P09630 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.59□□□□□ -1.83
HOXC6P09630 AL157687.1-201ENST00000554853 619 ntBASIC3.59□□□□□ -1.83
HOXC6P09630 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXC6P09630 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXC6P09630 MIR3162-201ENST00000581818 82 ntBASIC3.59□□□□□ -1.83
HOXC6P09630 AC008752.3-201ENST00000588113 712 ntBASIC3.59□□□□□ -1.83
HOXC6P09630 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXC6P09630 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.59□□□□□ -1.83
HOXC6P09630 uc_338.25-201ENST00000613756 156 ntBASIC3.59□□□□□ -1.83
HOXC6P09630 Y_RNA.804-201ENST00000615262 101 ntBASIC3.59□□□□□ -1.83
HOXC6P09630 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HOXC6P09630 AC099506.2-201ENST00000623074 221 ntBASIC3.59□□□□□ -1.83
HOXC6P09630 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.59□□□□□ -1.83
HOXC6P09630 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.59□□□□□ -1.84
HOXC6P09630 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.59□□□□□ -1.84
HOXC6P09630 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXC6P09630 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HOXC6P09630 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXC6P09630 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.58□□□□□ -1.84
HOXC6P09630 FRG1BP-201ENST00000278882 761 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 SNORD6-201ENST00000365444 73 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 RNU6-456P-201ENST00000384493 107 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 RNU6-114P-201ENST00000384704 105 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 MIR124-3-201ENST00000384866 87 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HOXC6P09630 AL139281.1-201ENST00000422120 335 ntBASIC3.58□□□□□ -1.84
HOXC6P09630 AC006548.1-201ENST00000427470 102 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms