Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF40O75150 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF40O75150 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF40O75150 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF40O75150 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RNF40O75150 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF40O75150 AC135776.4-201ENST00000624300 1904 ntBASIC5.88□□□□□ -1.47
RNF40O75150 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.88□□□□□ -1.47
RNF40O75150 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
RNF40O75150 RNU4-9P-201ENST00000364951 139 ntBASIC5.88□□□□□ -1.47
RNF40O75150 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF40O75150 RNU1-139P-201ENST00000391307 165 ntBASIC5.88□□□□□ -1.47
RNF40O75150 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF40O75150 ELOCP19-201ENST00000411919 318 ntBASIC5.88□□□□□ -1.47
RNF40O75150 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF40O75150 GNG5P5-201ENST00000420444 220 ntBASIC5.88□□□□□ -1.47
RNF40O75150 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF40O75150 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RNF40O75150 MRPL48P1-201ENST00000445390 636 ntBASIC5.88□□□□□ -1.47
RNF40O75150 RNU1-88P-201ENST00000459274 128 ntBASIC5.88□□□□□ -1.47
RNF40O75150 AK3P2-201ENST00000507976 429 ntBASIC5.88□□□□□ -1.47
RNF40O75150 HMGB3P3-201ENST00000510526 400 ntBASIC5.88□□□□□ -1.47
RNF40O75150 IGLV3-24-201ENST00000517477 197 ntBASIC5.88□□□□□ -1.47
RNF40O75150 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.88□□□□□ -1.47
RNF40O75150 AP006245.2-201ENST00000522004 300 ntBASIC5.88□□□□□ -1.47
RNF40O75150 RN7SL290P-201ENST00000578661 300 ntBASIC5.88□□□□□ -1.47
RNF40O75150 KLKP1-201ENST00000595979 403 ntBASIC5.88□□□□□ -1.47
RNF40O75150 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF40O75150 AC005828.6-201ENST00000606610 232 ntBASIC5.88□□□□□ -1.47
RNF40O75150 MIR8080-201ENST00000622224 89 ntBASIC5.88□□□□□ -1.47
RNF40O75150 SCARNA4-201ENST00000629045 128 ntBASIC5.88□□□□□ -1.47
RNF40O75150 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF40O75150 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF40O75150 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
RNF40O75150 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
RNF40O75150 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
RNF40O75150 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.88□□□□□ -1.47
RNF40O75150 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF40O75150 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF40O75150 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
RNF40O75150 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
RNF40O75150 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
RNF40O75150 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.87□□□□□ -1.47
RNF40O75150 AL034549.2-201ENST00000618285 3373 ntBASIC5.87□□□□□ -1.47
RNF40O75150 AL451142.2-201ENST00000429076 2090 ntBASIC5.87□□□□□ -1.47
RNF40O75150 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
RNF40O75150 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
RNF40O75150 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RNF40O75150 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RNF40O75150 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RNF40O75150 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RNF40O75150 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
RNF40O75150 AL159987.1-201ENST00000347911 293 ntBASIC5.87□□□□□ -1.47
RNF40O75150 Y_RNA.33-201ENST00000362591 102 ntBASIC5.87□□□□□ -1.47
RNF40O75150 SNORA63.4-201ENST00000362763 126 ntBASIC5.87□□□□□ -1.47
RNF40O75150 RNU6-428P-201ENST00000362942 107 ntBASIC5.87□□□□□ -1.47
RNF40O75150 RNU4-56P-201ENST00000364700 142 ntBASIC5.87□□□□□ -1.47
RNF40O75150 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.87□□□□□ -1.47
RNF40O75150 CTSL3P-202ENST00000412179 788 ntBASIC5.87□□□□□ -1.47
RNF40O75150 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC5.87□□□□□ -1.47
RNF40O75150 AC016712.1-201ENST00000431088 378 ntBASIC5.87□□□□□ -1.47
RNF40O75150 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.87□□□□□ -1.47
RNF40O75150 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.87□□□□□ -1.47
RNF40O75150 AC079168.2-201ENST00000453977 416 ntBASIC5.87□□□□□ -1.47
RNF40O75150 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.87□□□□□ -1.47
RNF40O75150 RPS27AP9-201ENST00000477681 438 ntBASIC5.87□□□□□ -1.47
RNF40O75150 AC012158.1-204ENST00000483430 465 ntBASIC5.87□□□□□ -1.47
RNF40O75150 RN7SL30P-201ENST00000488416 306 ntBASIC5.87□□□□□ -1.47
RNF40O75150 CYCTP-201ENST00000504253 315 ntBASIC5.87□□□□□ -1.47
RNF40O75150 SNORA40.9-201ENST00000515895 93 ntBASIC5.87□□□□□ -1.47
RNF40O75150 RNU6-1234P-201ENST00000516877 103 ntBASIC5.87□□□□□ -1.47
RNF40O75150 RN7SKP277-201ENST00000516895 283 ntBASIC5.87□□□□□ -1.47
RNF40O75150 RNA5SP471-201ENST00000516971 106 ntBASIC5.87□□□□□ -1.47
RNF40O75150 AC021678.3-201ENST00000517893 476 ntBASIC5.87□□□□□ -1.47
RNF40O75150 AC008489.1-201ENST00000524271 483 ntBASIC5.87□□□□□ -1.47
RNF40O75150 AC084851.1-201ENST00000529105 249 ntBASIC5.87□□□□□ -1.47
RNF40O75150 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.87□□□□□ -1.47
RNF40O75150 AC023043.4-201ENST00000612081 449 ntBASIC5.87□□□□□ -1.47
RNF40O75150 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
RNF40O75150 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.87□□□□□ -1.47
RNF40O75150 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RNF40O75150 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
RNF40O75150 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
RNF40O75150 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RNF40O75150 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RNF40O75150 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.86□□□□□ -1.47
RNF40O75150 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RNF40O75150 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
RNF40O75150 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.86□□□□□ -1.47
RNF40O75150 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.86□□□□□ -1.47
RNF40O75150 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.86□□□□□ -1.47
RNF40O75150 UBE2L2-201ENST00000254302 429 ntBASIC5.86□□□□□ -1.47
RNF40O75150 MIR412-201ENST00000362142 91 ntBASIC5.86□□□□□ -1.47
RNF40O75150 RNA5SP361-201ENST00000362686 118 ntBASIC5.86□□□□□ -1.47
RNF40O75150 RNA5SP326-201ENST00000363209 110 ntBASIC5.86□□□□□ -1.47
RNF40O75150 MT-TC-201ENST00000387405 66 ntBASIC5.86□□□□□ -1.47
RNF40O75150 RNA5SP241-201ENST00000391326 114 ntBASIC5.86□□□□□ -1.47
RNF40O75150 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.86□□□□□ -1.47
RNF40O75150 SNORD12B-201ENST00000410433 91 ntBASIC5.86□□□□□ -1.47
RNF40O75150 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms