Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AL590002.1-201ENST00000406554 418 ntBASIC4.14□□□□□ -1.75
CTNND1O60716 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.14□□□□□ -1.75
CTNND1O60716 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.14□□□□□ -1.75
CTNND1O60716 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.14□□□□□ -1.75
CTNND1O60716 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.14□□□□□ -1.75
CTNND1O60716 RPL36AP6-201ENST00000435770 321 ntBASIC4.14□□□□□ -1.75
CTNND1O60716 MTATP6P30-201ENST00000443540 664 ntBASIC4.14□□□□□ -1.75
CTNND1O60716 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.14□□□□□ -1.75
CTNND1O60716 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.14□□□□□ -1.75
CTNND1O60716 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.14□□□□□ -1.75
CTNND1O60716 AC019235.1-201ENST00000503847 207 ntBASIC4.14□□□□□ -1.75
CTNND1O60716 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CTNND1O60716 SCARNA15.2-201ENST00000516409 127 ntBASIC4.14□□□□□ -1.75
CTNND1O60716 RN7SKP258-201ENST00000517151 304 ntBASIC4.14□□□□□ -1.75
CTNND1O60716 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
CTNND1O60716 MTND4LP26-201ENST00000518144 282 ntBASIC4.14□□□□□ -1.75
CTNND1O60716 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.14□□□□□ -1.75
CTNND1O60716 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.14□□□□□ -1.75
CTNND1O60716 AL121992.2-201ENST00000606262 256 ntBASIC4.14□□□□□ -1.75
CTNND1O60716 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.14□□□□□ -1.75
CTNND1O60716 MIR8057-201ENST00000620957 69 ntBASIC4.14□□□□□ -1.75
CTNND1O60716 AC139792.3-201ENST00000623525 224 ntBASIC4.14□□□□□ -1.75
CTNND1O60716 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CTNND1O60716 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTNND1O60716 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CTNND1O60716 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTNND1O60716 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CTNND1O60716 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.13□□□□□ -1.75
CTNND1O60716 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.13□□□□□ -1.75
CTNND1O60716 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CTNND1O60716 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CTNND1O60716 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
CTNND1O60716 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.13□□□□□ -1.75
CTNND1O60716 AC006504.1-201ENST00000562493 3666 ntBASIC4.13□□□□□ -1.75
CTNND1O60716 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTNND1O60716 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CTNND1O60716 RNU6-1085P-201ENST00000363576 107 ntBASIC4.13□□□□□ -1.75
CTNND1O60716 Y_RNA.372-201ENST00000365599 102 ntBASIC4.13□□□□□ -1.75
CTNND1O60716 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTNND1O60716 Y_RNA.481-201ENST00000384373 102 ntBASIC4.13□□□□□ -1.75
CTNND1O60716 SNORA48.2-201ENST00000390926 124 ntBASIC4.13□□□□□ -1.75
CTNND1O60716 RPS4XP8-201ENST00000402039 771 ntBASIC4.13□□□□□ -1.75
CTNND1O60716 MIR548F1-201ENST00000408667 84 ntBASIC4.13□□□□□ -1.75
CTNND1O60716 AL513331.1-201ENST00000411908 397 ntBASIC4.13□□□□□ -1.75
CTNND1O60716 RHEBP3-201ENST00000411920 351 ntBASIC4.13□□□□□ -1.75
CTNND1O60716 ZNF90P2-204ENST00000419323 1075 ntBASIC4.13□□□□□ -1.75
CTNND1O60716 AL451054.2-201ENST00000420896 202 ntBASIC4.13□□□□□ -1.75
CTNND1O60716 NDUFB4P7-201ENST00000423198 363 ntBASIC4.13□□□□□ -1.75
CTNND1O60716 MTATP6P16-201ENST00000434543 526 ntBASIC4.13□□□□□ -1.75
CTNND1O60716 RPS15AP9-201ENST00000439856 381 ntBASIC4.13□□□□□ -1.75
CTNND1O60716 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.13□□□□□ -1.75
CTNND1O60716 AC013267.1-201ENST00000458227 267 ntBASIC4.13□□□□□ -1.75
CTNND1O60716 RPL31P60-201ENST00000478450 367 ntBASIC4.13□□□□□ -1.75
CTNND1O60716 ARL4AP2-201ENST00000507378 601 ntBASIC4.13□□□□□ -1.75
CTNND1O60716 AC011352.1-201ENST00000512300 793 ntBASIC4.13□□□□□ -1.75
CTNND1O60716 IGKV2-26-201ENST00000518305 343 ntBASIC4.13□□□□□ -1.75
CTNND1O60716 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.13□□□□□ -1.75
CTNND1O60716 AP006587.4-201ENST00000526053 529 ntBASIC4.13□□□□□ -1.75
CTNND1O60716 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.13□□□□□ -1.75
CTNND1O60716 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.13□□□□□ -1.75
CTNND1O60716 HMGB1P6-201ENST00000569046 646 ntBASIC4.13□□□□□ -1.75
CTNND1O60716 MTATP6P3-201ENST00000581686 676 ntBASIC4.13□□□□□ -1.75
CTNND1O60716 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.13□□□□□ -1.75
CTNND1O60716 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.13□□□□□ -1.75
CTNND1O60716 AC012531.5-201ENST00000611375 151 ntBASIC4.13□□□□□ -1.75
CTNND1O60716 AC090517.2-201ENST00000614966 680 ntBASIC4.13□□□□□ -1.75
CTNND1O60716 AL589994.2-201ENST00000621124 579 ntBASIC4.13□□□□□ -1.75
CTNND1O60716 AC007998.5-201ENST00000622938 237 ntBASIC4.13□□□□□ -1.75
CTNND1O60716 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.13□□□□□ -1.75
CTNND1O60716 AL732372.2-225ENST00000642124 456 ntBASIC4.13□□□□□ -1.75
CTNND1O60716 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.13□□□□□ -1.75
CTNND1O60716 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTNND1O60716 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTNND1O60716 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CTNND1O60716 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTNND1O60716 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CTNND1O60716 MIR634-201ENST00000385208 97 ntBASIC4.12□□□□□ -1.75
CTNND1O60716 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.12□□□□□ -1.75
CTNND1O60716 RN7SKP53-201ENST00000411337 315 ntBASIC4.12□□□□□ -1.75
CTNND1O60716 AL353193.1-201ENST00000421444 268 ntBASIC4.12□□□□□ -1.75
CTNND1O60716 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.12□□□□□ -1.75
CTNND1O60716 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.12□□□□□ -1.75
CTNND1O60716 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CTNND1O60716 USP9YP18-201ENST00000425912 695 ntBASIC4.12□□□□□ -1.75
CTNND1O60716 AC093106.2-201ENST00000428212 385 ntBASIC4.12□□□□□ -1.75
CTNND1O60716 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.12□□□□□ -1.75
CTNND1O60716 MTATP6P13-201ENST00000438531 667 ntBASIC4.12□□□□□ -1.75
CTNND1O60716 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.12□□□□□ -1.75
CTNND1O60716 Z99127.3-201ENST00000448158 395 ntBASIC4.12□□□□□ -1.75
CTNND1O60716 AC027673.1-201ENST00000456245 405 ntBASIC4.12□□□□□ -1.75
CTNND1O60716 HMGN2P16-201ENST00000456802 261 ntBASIC4.12□□□□□ -1.75
CTNND1O60716 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
CTNND1O60716 AC116562.3-201ENST00000506136 177 ntBASIC4.12□□□□□ -1.75
CTNND1O60716 NDUFB4P9-201ENST00000511646 388 ntBASIC4.12□□□□□ -1.75
CTNND1O60716 SNORD27.1-201ENST00000516319 72 ntBASIC4.12□□□□□ -1.75
CTNND1O60716 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.12□□□□□ -1.75
CTNND1O60716 AC068587.5-201ENST00000528506 175 ntBASIC4.12□□□□□ -1.75
CTNND1O60716 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CTNND1O60716 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.12□□□□□ -1.75
CTNND1O60716 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms