Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHISA3A0PJX4 RNU6-37P-201ENST00000362692 107 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 Y_RNA.117-201ENST00000363294 101 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 Y_RNA.183-201ENST00000363882 113 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 RNU6-11P-201ENST00000364234 107 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 RNU6-7-201ENST00000364784 107 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 RNU6-384P-201ENST00000364900 104 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 RNU6-806P-201ENST00000365147 105 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 RNU6-8-201ENST00000365467 107 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHISA3A0PJX4 RNU6-25P-201ENST00000383873 107 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 RNU6-1-201ENST00000383898 107 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 RNU6-48P-201ENST00000384161 107 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 RNU6-36P-201ENST00000384172 107 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 RNU6-4P-201ENST00000384205 107 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 RNU6-5P-201ENST00000384238 107 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 RNU6-3P-201ENST00000384314 107 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 RNU6-16P-201ENST00000384385 107 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 RNU6-15P-201ENST00000384534 107 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 RNU6-2-201ENST00000384627 107 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 RNU6-29P-201ENST00000384637 107 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 RNU6-9-201ENST00000384776 107 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 RNU6-33P-201ENST00000384793 107 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 MIR521-1-201ENST00000384902 87 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 MIR600-201ENST00000385007 98 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SHISA3A0PJX4 AL022722.2-201ENST00000402519 180 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 AL357515.1-201ENST00000402967 542 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 Y_RNA.592-201ENST00000410274 109 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 RNA5SP146-201ENST00000410743 123 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 RNU4-61P-201ENST00000411243 107 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 AL592148.1-201ENST00000413568 445 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.26□□□□□ -1.73
SHISA3A0PJX4 TOMM20P4-201ENST00000427861 435 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 AC087650.1-201ENST00000431445 468 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 AL159987.2-201ENST00000432754 307 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 AL590664.1-201ENST00000448065 339 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 MTND4LP30-201ENST00000454092 297 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 RPL12P20-201ENST00000475538 479 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 TRBVB-201ENST00000477100 408 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 AC008958.1-201ENST00000511047 682 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.26□□□□□ -1.73
SHISA3A0PJX4 RNU6-397P-201ENST00000516226 104 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 AC109479.2-201ENST00000517842 174 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.26□□□□□ -1.73
SHISA3A0PJX4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.26□□□□□ -1.73
SHISA3A0PJX4 AC209154.1-201ENST00000582156 337 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 RNU6-6P-201ENST00000606623 107 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 AC022467.1-201ENST00000614738 749 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 SDR42E1P4-201ENST00000620894 481 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 MIR8080-201ENST00000622224 89 ntBASIC4.26□□□□□ -1.73
SHISA3A0PJX4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHISA3A0PJX4 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
SHISA3A0PJX4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SHISA3A0PJX4 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SHISA3A0PJX4 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHISA3A0PJX4 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHISA3A0PJX4 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHISA3A0PJX4 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
SHISA3A0PJX4 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SHISA3A0PJX4 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SHISA3A0PJX4 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHISA3A0PJX4 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SHISA3A0PJX4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.25□□□□□ -1.73
SHISA3A0PJX4 AC007685.1-201ENST00000329806 452 ntBASIC4.25□□□□□ -1.73
SHISA3A0PJX4 SNORD14B-201ENST00000364533 90 ntBASIC4.25□□□□□ -1.73
SHISA3A0PJX4 RNU6-827P-201ENST00000365553 106 ntBASIC4.25□□□□□ -1.73
SHISA3A0PJX4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.25□□□□□ -1.73
SHISA3A0PJX4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.25□□□□□ -1.73
SHISA3A0PJX4 MTCYBP2-201ENST00000407745 171 ntBASIC4.25□□□□□ -1.73
SHISA3A0PJX4 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.25□□□□□ -1.73
SHISA3A0PJX4 AL117339.3-201ENST00000418733 162 ntBASIC4.25□□□□□ -1.73
SHISA3A0PJX4 AC079780.1-201ENST00000428259 207 ntBASIC4.25□□□□□ -1.73
SHISA3A0PJX4 AL627311.1-201ENST00000431514 115 ntBASIC4.25□□□□□ -1.73
SHISA3A0PJX4 AL163193.1-201ENST00000444895 788 ntBASIC4.25□□□□□ -1.73
SHISA3A0PJX4 AL160314.1-201ENST00000490836 438 ntBASIC4.25□□□□□ -1.73
SHISA3A0PJX4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.25□□□□□ -1.73
SHISA3A0PJX4 BX510359.5-201ENST00000515651 304 ntBASIC4.25□□□□□ -1.73
SHISA3A0PJX4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.25□□□□□ -1.73
SHISA3A0PJX4 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.25□□□□□ -1.73
SHISA3A0PJX4 AP004371.1-201ENST00000525240 214 ntBASIC4.25□□□□□ -1.73
SHISA3A0PJX4 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.25□□□□□ -1.73
SHISA3A0PJX4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.25□□□□□ -1.73
SHISA3A0PJX4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.25□□□□□ -1.73
SHISA3A0PJX4 AL645944.1-201ENST00000603857 493 ntBASIC4.25□□□□□ -1.73
SHISA3A0PJX4 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.25□□□□□ -1.73
SHISA3A0PJX4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.25□□□□□ -1.73
SHISA3A0PJX4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.25□□□□□ -1.73
SHISA3A0PJX4 AL022401.1-201ENST00000619498 108 ntBASIC4.25□□□□□ -1.73
SHISA3A0PJX4 AL360181.4-201ENST00000621752 134 ntBASIC4.25□□□□□ -1.73
SHISA3A0PJX4 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.25□□□□□ -1.73
SHISA3A0PJX4 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.25□□□□□ -1.73
SHISA3A0PJX4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHISA3A0PJX4 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.25□□□□□ -1.73
SHISA3A0PJX4 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SHISA3A0PJX4 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.25□□□□□ -1.73
SHISA3A0PJX4 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.25□□□□□ -1.73
SHISA3A0PJX4 MTND5P6-201ENST00000422338 1798 ntBASIC4.25□□□□□ -1.73
SHISA3A0PJX4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms