Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 AC005046.1-201ENST00000608515 625 ntBASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 AP002826.1-201ENST00000608835 315 ntBASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 AC099654.2-201ENST00000433031 1980 ntBASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA11Q9Y5H2 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PCDHGA11Q9Y5H2 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.15□□□□□ -1.58
PCDHGA11Q9Y5H2 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PCDHGA11Q9Y5H2 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 Y_RNA.123-201ENST00000363338 102 ntBASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 RN7SKP224-201ENST00000364140 325 ntBASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 RN7SKP124-201ENST00000364730 341 ntBASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 RNU6-746P-201ENST00000384112 109 ntBASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 RNU6-886P-201ENST00000384319 105 ntBASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 AC007560.1-201ENST00000426912 237 ntBASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 AL390119.1-201ENST00000440329 312 ntBASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 AC034236.1-201ENST00000469891 373 ntBASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 RPS18P6-201ENST00000476880 458 ntBASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 ANXA2P1-201ENST00000505539 926 ntBASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 RNU6-1256P-201ENST00000516539 103 ntBASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 HMGB1P14-201ENST00000557424 591 ntBASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 AC136932.1-201ENST00000574771 208 ntBASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 AC023575.1-201ENST00000580510 358 ntBASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 AC000068.2-201ENST00000608816 460 ntBASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 CENPF-206ENST00000614578 528 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 AC074101.1-201ENST00000637861 241 ntBASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
PCDHGA11Q9Y5H2 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 RNU6-428P-201ENST00000362942 107 ntBASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 RNU6-378P-201ENST00000384324 107 ntBASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 SNORA40C-201ENST00000391285 128 ntBASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 BTF3L4P2-201ENST00000392798 346 ntBASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 Y_RNA.793-201ENST00000411222 111 ntBASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 Z85995.1-201ENST00000415547 335 ntBASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 CYP4F29P-201ENST00000420685 446 ntBASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 AC244098.2-201ENST00000422068 99 ntBASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 NDUFB4P7-201ENST00000423198 363 ntBASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 RPL21P40-201ENST00000428586 483 ntBASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 RPL7L1P9-201ENST00000431298 745 ntBASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 AL136097.1-201ENST00000456945 913 ntBASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 RPS29P27-201ENST00000463711 170 ntBASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 AC100832.1-201ENST00000471945 383 ntBASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 RN7SL346P-201ENST00000491561 294 ntBASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 SNORA31.19-201ENST00000517079 126 ntBASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 MIR8080-201ENST00000622224 89 ntBASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 AC004817.4-201ENST00000602396 3625 ntBASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
PCDHGA11Q9Y5H2 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHGA11Q9Y5H2 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHGA11Q9Y5H2 AC112198.2-201ENST00000426589 6996 ntBASIC5.13□□□□□ -1.59
PCDHGA11Q9Y5H2 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHGA11Q9Y5H2 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PCDHGA11Q9Y5H2 MIR133B-201ENST00000362210 119 ntBASIC5.13□□□□□ -1.59
PCDHGA11Q9Y5H2 Y_RNA.83-201ENST00000363005 113 ntBASIC5.13□□□□□ -1.59
PCDHGA11Q9Y5H2 RNA5SP234-201ENST00000363916 119 ntBASIC5.13□□□□□ -1.59
PCDHGA11Q9Y5H2 Y_RNA.269-201ENST00000364685 89 ntBASIC5.13□□□□□ -1.59
PCDHGA11Q9Y5H2 SNORA19-201ENST00000384737 128 ntBASIC5.13□□□□□ -1.59
PCDHGA11Q9Y5H2 AL139156.1-201ENST00000412785 841 ntBASIC5.13□□□□□ -1.59
PCDHGA11Q9Y5H2 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHGA11Q9Y5H2 AL590383.1-201ENST00000428602 75 ntBASIC5.13□□□□□ -1.59
PCDHGA11Q9Y5H2 AC007919.1-201ENST00000429380 217 ntBASIC5.13□□□□□ -1.59
PCDHGA11Q9Y5H2 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDHGA11Q9Y5H2 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDHGA11Q9Y5H2 RN7SL273P-201ENST00000481561 299 ntBASIC5.13□□□□□ -1.59
PCDHGA11Q9Y5H2 RN7SL447P-201ENST00000494711 245 ntBASIC5.13□□□□□ -1.59
PCDHGA11Q9Y5H2 RN7SL466P-201ENST00000497546 295 ntBASIC5.13□□□□□ -1.59
PCDHGA11Q9Y5H2 HMGB1P40-201ENST00000525121 540 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms