Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 AC069439.1-201ENST00000494739 167 ntBASIC3.54□□□□□ -1.84
DTX4Q9Y2E6 RPL23AP55-201ENST00000498163 452 ntBASIC3.54□□□□□ -1.84
DTX4Q9Y2E6 SNORA31.8-201ENST00000516327 108 ntBASIC3.54□□□□□ -1.84
DTX4Q9Y2E6 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.54□□□□□ -1.84
DTX4Q9Y2E6 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.54□□□□□ -1.84
DTX4Q9Y2E6 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
DTX4Q9Y2E6 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
DTX4Q9Y2E6 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
DTX4Q9Y2E6 MED28P6-201ENST00000558776 231 ntBASIC3.54□□□□□ -1.84
DTX4Q9Y2E6 HSPE1P5-201ENST00000561489 272 ntBASIC3.54□□□□□ -1.84
DTX4Q9Y2E6 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.54□□□□□ -1.84
DTX4Q9Y2E6 AC091135.1-201ENST00000585943 307 ntBASIC3.54□□□□□ -1.84
DTX4Q9Y2E6 AC008752.3-201ENST00000588113 712 ntBASIC3.54□□□□□ -1.84
DTX4Q9Y2E6 AC010591.1-201ENST00000603941 649 ntBASIC3.54□□□□□ -1.84
DTX4Q9Y2E6 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
DTX4Q9Y2E6 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
DTX4Q9Y2E6 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.54□□□□□ -1.84
DTX4Q9Y2E6 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
DTX4Q9Y2E6 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
DTX4Q9Y2E6 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.54□□□□□ -1.84
DTX4Q9Y2E6 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
DTX4Q9Y2E6 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.54□□□□□ -1.84
DTX4Q9Y2E6 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
DTX4Q9Y2E6 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 CKAP2P1-201ENST00000555477 2049 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 MTND5P17-201ENST00000418405 1603 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 DEFB108F-201ENST00000344638 222 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 RNU6-179P-201ENST00000363350 107 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 SNORA62.1-201ENST00000364287 154 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 GTF2IP20-201ENST00000431663 360 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 VDAC1P3-201ENST00000434069 851 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 RPL36AP6-201ENST00000435770 321 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 SETP5-201ENST00000437270 562 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 SEPT14P3-201ENST00000439401 183 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 MTCO3P18-201ENST00000440206 761 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 AC016691.1-201ENST00000441321 413 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 AL732372.2-207ENST00000445840 183 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 SEPT14P2-201ENST00000453405 183 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 RNU7-182P-201ENST00000459009 62 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 MRPS17P3-201ENST00000465453 385 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 SEPT14P4-201ENST00000513445 186 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 AC105417.1-201ENST00000514691 285 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 RNA5SP401-201ENST00000515920 127 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 SNORA40.12-201ENST00000516329 111 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 SNORA67.7-201ENST00000516664 135 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 AC007991.1-201ENST00000522680 631 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 FO082796.1-201ENST00000523795 183 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 OR5AL2P-201ENST00000532185 920 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 AC005951.2-201ENST00000576282 495 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 AC063943.3-201ENST00000615562 356 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 YWHAEP7-203ENST00000622054 312 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 AC039056.2-201ENST00000622261 511 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 FER-210ENST00000628534 558 ntTSL 5 BASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 U6.114-201ENST00000636407 96 ntBASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.53□□□□□ -1.84
DTX4Q9Y2E6 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
DTX4Q9Y2E6 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.52□□□□□ -1.85
DTX4Q9Y2E6 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
DTX4Q9Y2E6 RNA5SP124-201ENST00000362739 110 ntBASIC3.52□□□□□ -1.85
DTX4Q9Y2E6 Y_RNA.70-201ENST00000362886 110 ntBASIC3.52□□□□□ -1.85
DTX4Q9Y2E6 AL359837.1-201ENST00000381357 287 ntBASIC3.52□□□□□ -1.85
DTX4Q9Y2E6 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.52□□□□□ -1.85
DTX4Q9Y2E6 RNU6-876P-201ENST00000391295 104 ntBASIC3.52□□□□□ -1.85
DTX4Q9Y2E6 FGF7P8-201ENST00000402994 292 ntBASIC3.52□□□□□ -1.85
DTX4Q9Y2E6 RNU6-908P-201ENST00000410160 94 ntBASIC3.52□□□□□ -1.85
DTX4Q9Y2E6 RN7SKP202-201ENST00000410439 330 ntBASIC3.52□□□□□ -1.85
DTX4Q9Y2E6 AC138393.2-201ENST00000414742 246 ntBASIC3.52□□□□□ -1.85
DTX4Q9Y2E6 ZNF90P2-204ENST00000419323 1075 ntBASIC3.52□□□□□ -1.85
DTX4Q9Y2E6 AL139247.1-201ENST00000422768 325 ntBASIC3.52□□□□□ -1.85
DTX4Q9Y2E6 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.52□□□□□ -1.85
DTX4Q9Y2E6 MTND4P25-201ENST00000441039 533 ntBASIC3.52□□□□□ -1.85
DTX4Q9Y2E6 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.52□□□□□ -1.85
DTX4Q9Y2E6 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
DTX4Q9Y2E6 DPPA3P1-201ENST00000448050 469 ntBASIC3.52□□□□□ -1.85
DTX4Q9Y2E6 AL500522.2-201ENST00000448562 343 ntBASIC3.52□□□□□ -1.85
DTX4Q9Y2E6 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.52□□□□□ -1.85
DTX4Q9Y2E6 RPS29P15-201ENST00000458329 171 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms