Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 RPL7L1P9-201ENST00000431298 745 ntBASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 AC007395.1-201ENST00000451333 677 ntBASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 AC009963.2-201ENST00000453431 138 ntBASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 Y_RNA.650-201ENST00000459002 102 ntBASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 Y_RNA.638-201ENST00000459374 113 ntBASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 RN7SL591P-201ENST00000496150 292 ntBASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 Y_RNA.777-201ENST00000516982 102 ntBASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 RN7SKP272-201ENST00000516988 232 ntBASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 MRPS18CP4-201ENST00000535821 231 ntBASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 Y_RNA.771-201ENST00000598668 102 ntBASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 AC011445.2-201ENST00000599274 173 ntBASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 RMST_6.1-201ENST00000611980 203 ntBASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 Y_RNA.789-201ENST00000622480 102 ntBASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 SCARNA4-201ENST00000629045 128 ntBASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 U4.7-201ENST00000638126 106 ntBASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 OR4G2P-202ENST00000641004 1759 ntBASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 AC006484.1-201ENST00000435086 1884 ntBASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDHGC3Q9UN70 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 RNU6-17P-201ENST00000384245 107 ntBASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 RNU6-18P-201ENST00000384527 107 ntBASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 AL390729.2-201ENST00000416137 156 ntBASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 AP001324.2-201ENST00000461163 319 ntBASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 OR7H2P-201ENST00000513483 306 ntBASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 HMGB1P14-201ENST00000557424 591 ntBASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 AC023421.1-201ENST00000590535 1785 ntBASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 AL078605.1-201ENST00000603529 500 ntBASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 BRDTP1-201ENST00000605735 677 ntBASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 AC090740.1-201ENST00000623193 2262 ntBASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 AL049767.1-202ENST00000637826 242 ntBASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGC3Q9UN70 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 RN7SKP160-201ENST00000363804 340 ntBASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 RNA5SP435-201ENST00000364044 108 ntBASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 RN7SKP269-201ENST00000365545 319 ntBASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 Y_RNA.383-201ENST00000383855 97 ntBASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 RNU6-843P-201ENST00000384454 104 ntBASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 MIR589-201ENST00000385238 99 ntBASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 SNORA40C-201ENST00000391285 128 ntBASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 RN7SKP114-201ENST00000410327 279 ntBASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 RNU2-51P-201ENST00000410708 197 ntBASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 RN7SKP206-201ENST00000410823 293 ntBASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 AL138785.1-201ENST00000425821 331 ntBASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 RPS15AP7-201ENST00000439294 405 ntBASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 AC087477.1-201ENST00000465747 340 ntBASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 AL049830.2-201ENST00000480072 201 ntBASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 AC006427.1-201ENST00000514359 712 ntBASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 SNORA31.18-201ENST00000517043 134 ntBASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 FAM60BP-201ENST00000578364 658 ntBASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 AC108706.1-201ENST00000611053 297 ntBASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 AC090617.7-201ENST00000623952 126 ntBASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGC3Q9UN70 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms