Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 RNU6-278P-201ENST00000390945 109 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 AC068050.1-201ENST00000394891 380 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 MRPL42P2-201ENST00000403169 426 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 RPL21P23-201ENST00000446654 460 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 VN1R17P-201ENST00000472048 1090 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 AC135721.1-201ENST00000497954 479 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 AC117522.1-201ENST00000509821 380 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 AC074250.1-201ENST00000511117 192 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 Y_RNA.693-201ENST00000516641 110 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 Y_RNA.702-201ENST00000516843 96 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 AL157687.1-201ENST00000554853 619 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 SUB1P2-201ENST00000556401 297 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 AC007687.1-201ENST00000602704 304 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 AL161756.2-201ENST00000604597 246 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 AL136363.1-201ENST00000605349 337 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 AL161734.1-201ENST00000609720 557 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 AC006338.1-201ENST00000618453 749 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 MIR7975-201ENST00000619350 68 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 DUXAP9-208ENST00000622815 614 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 AC139792.3-201ENST00000623525 224 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 PWAR6-201ENST00000552334 4618 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 Y_RNA.11-201ENST00000362375 109 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 Y_RNA.89-201ENST00000363031 102 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 RNU6-169P-201ENST00000365336 107 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 Y_RNA.381-201ENST00000365666 102 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 RNU6-483P-201ENST00000384088 108 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 RNU6-754P-201ENST00000391166 107 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 RNA5SP129-201ENST00000410276 118 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 RNU2-8P-201ENST00000410727 190 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 UBE2FP1-201ENST00000416536 447 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 MTCO1P20-201ENST00000425366 358 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 CYCSP43-201ENST00000438233 310 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 DPPA3P1-201ENST00000448050 469 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 AC108059.3-201ENST00000456388 214 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 RNU7-59P-201ENST00000459101 61 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 RPS29P25-201ENST00000481709 171 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 AC108860.1-201ENST00000484521 383 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 RNA5SP337-201ENST00000517007 109 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 RN7SKP289-201ENST00000517244 295 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 AC007991.1-201ENST00000522680 631 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 AP000857.1-201ENST00000532151 543 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 OR5B10P-201ENST00000532869 642 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 MIR3146-201ENST00000580367 79 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 AC063943.3-201ENST00000615562 356 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 AC022140.2-201ENST00000623500 188 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 AC048347.1-201ENST00000624621 427 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 AP000553.6-201ENST00000641242 118 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 AC092326.2-201ENST00000624772 1561 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 AL138713.1-201ENST00000624026 2130 ntBASIC3.62□□□□□ -1.83
NCKIPSDQ9NZQ3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 AC009812.4-201ENST00000569134 1805 ntBASIC3.61□□□□□ -1.83
NCKIPSDQ9NZQ3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms