Protein–RNA interactions for Protein: Q9NS15

LTBP3, Latent-transforming growth factor beta-binding protein 3, humanhuman

Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3Q9NS15 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LTBP3Q9NS15 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
LTBP3Q9NS15 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LTBP3Q9NS15 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.83□□□□□ -1.64
LTBP3Q9NS15 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.83□□□□□ -1.64
LTBP3Q9NS15 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LTBP3Q9NS15 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LTBP3Q9NS15 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
LTBP3Q9NS15 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LTBP3Q9NS15 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
LTBP3Q9NS15 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LTBP3Q9NS15 RNU6-43P-201ENST00000384302 107 ntBASIC4.82□□□□□ -1.64
LTBP3Q9NS15 SNORD3H-201ENST00000384486 214 ntBASIC4.82□□□□□ -1.64
LTBP3Q9NS15 RNU6-1127P-201ENST00000384580 107 ntBASIC4.82□□□□□ -1.64
LTBP3Q9NS15 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.82□□□□□ -1.64
LTBP3Q9NS15 RPL7AP73-201ENST00000413490 353 ntBASIC4.82□□□□□ -1.64
LTBP3Q9NS15 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.82□□□□□ -1.64
LTBP3Q9NS15 GPM6BP2-201ENST00000432046 144 ntBASIC4.82□□□□□ -1.64
LTBP3Q9NS15 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.82□□□□□ -1.64
LTBP3Q9NS15 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LTBP3Q9NS15 GPM6BP1-201ENST00000446387 144 ntBASIC4.82□□□□□ -1.64
LTBP3Q9NS15 AC020550.1-201ENST00000447385 163 ntBASIC4.82□□□□□ -1.64
LTBP3Q9NS15 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.82□□□□□ -1.64
LTBP3Q9NS15 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.82□□□□□ -1.64
LTBP3Q9NS15 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.82□□□□□ -1.64
LTBP3Q9NS15 AC012181.1-201ENST00000479895 423 ntBASIC4.82□□□□□ -1.64
LTBP3Q9NS15 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.82□□□□□ -1.64
LTBP3Q9NS15 RN7SKP18-201ENST00000516005 275 ntBASIC4.82□□□□□ -1.64
LTBP3Q9NS15 RNU6-677P-201ENST00000516914 101 ntBASIC4.82□□□□□ -1.64
LTBP3Q9NS15 Y_RNA.718-201ENST00000517110 102 ntBASIC4.82□□□□□ -1.64
LTBP3Q9NS15 AC087369.1-201ENST00000520775 996 ntBASIC4.82□□□□□ -1.64
LTBP3Q9NS15 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.82□□□□□ -1.64
LTBP3Q9NS15 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.82□□□□□ -1.64
LTBP3Q9NS15 AL121603.1-201ENST00000553815 142 ntBASIC4.82□□□□□ -1.64
LTBP3Q9NS15 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.82□□□□□ -1.64
LTBP3Q9NS15 MIR3941-201ENST00000582572 103 ntBASIC4.82□□□□□ -1.64
LTBP3Q9NS15 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.82□□□□□ -1.64
LTBP3Q9NS15 AC009570.1-201ENST00000609599 745 ntBASIC4.82□□□□□ -1.64
LTBP3Q9NS15 U2.17-201ENST00000611454 95 ntBASIC4.82□□□□□ -1.64
LTBP3Q9NS15 SDR42E1P2-201ENST00000614861 481 ntBASIC4.82□□□□□ -1.64
LTBP3Q9NS15 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LTBP3Q9NS15 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LTBP3Q9NS15 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LTBP3Q9NS15 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
LTBP3Q9NS15 AC074029.4-201ENST00000624796 1859 ntBASIC4.82□□□□□ -1.64
LTBP3Q9NS15 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LTBP3Q9NS15 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
LTBP3Q9NS15 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.82□□□□□ -1.64
LTBP3Q9NS15 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LTBP3Q9NS15 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LTBP3Q9NS15 RNA5SP267-201ENST00000364893 126 ntBASIC4.81□□□□□ -1.64
LTBP3Q9NS15 Y_RNA.422-201ENST00000384054 114 ntBASIC4.81□□□□□ -1.64
LTBP3Q9NS15 RNA5SP187-201ENST00000384400 119 ntBASIC4.81□□□□□ -1.64
LTBP3Q9NS15 SNORA75.4-201ENST00000391278 119 ntBASIC4.81□□□□□ -1.64
LTBP3Q9NS15 MIR548P-201ENST00000408336 84 ntBASIC4.81□□□□□ -1.64
LTBP3Q9NS15 RNA5SP111-201ENST00000411386 101 ntBASIC4.81□□□□□ -1.64
LTBP3Q9NS15 RPL37P10-201ENST00000412884 288 ntBASIC4.81□□□□□ -1.64
LTBP3Q9NS15 AL158156.1-201ENST00000422509 473 ntBASIC4.81□□□□□ -1.64
LTBP3Q9NS15 AL139247.1-201ENST00000422768 325 ntBASIC4.81□□□□□ -1.64
LTBP3Q9NS15 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.81□□□□□ -1.64
LTBP3Q9NS15 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.81□□□□□ -1.64
LTBP3Q9NS15 HMGB3P11-201ENST00000440127 604 ntBASIC4.81□□□□□ -1.64
LTBP3Q9NS15 IPO7P1-201ENST00000442031 636 ntBASIC4.81□□□□□ -1.64
LTBP3Q9NS15 NEFMP1-201ENST00000443423 1006 ntBASIC4.81□□□□□ -1.64
LTBP3Q9NS15 RPS15AP27-201ENST00000449183 343 ntBASIC4.81□□□□□ -1.64
LTBP3Q9NS15 RNU6-953P-201ENST00000459154 107 ntBASIC4.81□□□□□ -1.64
LTBP3Q9NS15 VN1R17P-201ENST00000472048 1090 ntBASIC4.81□□□□□ -1.64
LTBP3Q9NS15 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.81□□□□□ -1.64
LTBP3Q9NS15 RNU6-123P-201ENST00000516163 102 ntBASIC4.81□□□□□ -1.64
LTBP3Q9NS15 RNU6-256P-201ENST00000516747 97 ntBASIC4.81□□□□□ -1.64
LTBP3Q9NS15 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.81□□□□□ -1.64
LTBP3Q9NS15 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.81□□□□□ -1.64
LTBP3Q9NS15 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.81□□□□□ -1.64
LTBP3Q9NS15 AC020661.2-201ENST00000560114 134 ntBASIC4.81□□□□□ -1.64
LTBP3Q9NS15 RPL23AP87-202ENST00000573039 466 ntBASIC4.81□□□□□ -1.64
LTBP3Q9NS15 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.81□□□□□ -1.64
LTBP3Q9NS15 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.81□□□□□ -1.64
LTBP3Q9NS15 CYP2C61P-201ENST00000604072 290 ntBASIC4.81□□□□□ -1.64
LTBP3Q9NS15 AC104662.1-201ENST00000604448 511 ntBASIC4.81□□□□□ -1.64
LTBP3Q9NS15 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LTBP3Q9NS15 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LTBP3Q9NS15 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.81□□□□□ -1.64
LTBP3Q9NS15 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
LTBP3Q9NS15 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LTBP3Q9NS15 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LTBP3Q9NS15 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LTBP3Q9NS15 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.81□□□□□ -1.64
LTBP3Q9NS15 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
LTBP3Q9NS15 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LTBP3Q9NS15 AL731532.2-201ENST00000623542 1953 ntBASIC4.8□□□□□ -1.64
LTBP3Q9NS15 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LTBP3Q9NS15 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
LTBP3Q9NS15 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LTBP3Q9NS15 Y_RNA.399-201ENST00000383955 105 ntBASIC4.8□□□□□ -1.64
LTBP3Q9NS15 RNU6-190P-201ENST00000384154 102 ntBASIC4.8□□□□□ -1.64
LTBP3Q9NS15 MT-TR-201ENST00000387439 65 ntBASIC4.8□□□□□ -1.64
LTBP3Q9NS15 Y_RNA.579-201ENST00000390939 94 ntBASIC4.8□□□□□ -1.64
LTBP3Q9NS15 MTCYBP4-201ENST00000401524 249 ntBASIC4.8□□□□□ -1.64
LTBP3Q9NS15 AL583834.1-201ENST00000406943 343 ntBASIC4.8□□□□□ -1.64
LTBP3Q9NS15 MIR548F5-201ENST00000408421 86 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms