Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC110792.1-201ENST00000491826 472 ntBASIC4.66□□□□□ -1.66
SSU72Q9NP77 AC008958.1-201ENST00000511047 682 ntBASIC4.66□□□□□ -1.66
SSU72Q9NP77 BX510359.5-201ENST00000515651 304 ntBASIC4.66□□□□□ -1.66
SSU72Q9NP77 RNU6-897P-201ENST00000517135 105 ntBASIC4.66□□□□□ -1.66
SSU72Q9NP77 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.66□□□□□ -1.66
SSU72Q9NP77 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
SSU72Q9NP77 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.66□□□□□ -1.66
SSU72Q9NP77 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.66□□□□□ -1.66
SSU72Q9NP77 FKBP1AP1-201ENST00000594588 318 ntBASIC4.66□□□□□ -1.66
SSU72Q9NP77 AL158827.2-201ENST00000602494 330 ntBASIC4.66□□□□□ -1.66
SSU72Q9NP77 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.66□□□□□ -1.66
SSU72Q9NP77 AC123912.5-201ENST00000605470 343 ntBASIC4.66□□□□□ -1.66
SSU72Q9NP77 AC126915.2-201ENST00000610957 190 ntBASIC4.66□□□□□ -1.66
SSU72Q9NP77 SNX18P1Y-201ENST00000616231 511 ntBASIC4.66□□□□□ -1.66
SSU72Q9NP77 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
SSU72Q9NP77 AL691447.3-201ENST00000635020 330 ntBASIC4.66□□□□□ -1.66
SSU72Q9NP77 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSU72Q9NP77 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSU72Q9NP77 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSU72Q9NP77 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.66□□□□□ -1.66
SSU72Q9NP77 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.66□□□□□ -1.66
SSU72Q9NP77 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSU72Q9NP77 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
SSU72Q9NP77 AC107027.3-201ENST00000565095 3473 ntBASIC4.65□□□□□ -1.66
SSU72Q9NP77 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
SSU72Q9NP77 OR56A5-201ENST00000340110 738 ntBASIC4.65□□□□□ -1.67
SSU72Q9NP77 Y_RNA.19-201ENST00000362462 99 ntBASIC4.65□□□□□ -1.67
SSU72Q9NP77 Y_RNA.105-201ENST00000363182 111 ntBASIC4.65□□□□□ -1.67
SSU72Q9NP77 SNORA36C-201ENST00000384289 132 ntBASIC4.65□□□□□ -1.67
SSU72Q9NP77 RNU6-790P-201ENST00000384479 105 ntBASIC4.65□□□□□ -1.67
SSU72Q9NP77 SNORA70E-201ENST00000384492 135 ntBASIC4.65□□□□□ -1.67
SSU72Q9NP77 MIR143-201ENST00000385300 106 ntBASIC4.65□□□□□ -1.67
SSU72Q9NP77 RNU6-882P-201ENST00000391025 103 ntBASIC4.65□□□□□ -1.67
SSU72Q9NP77 MIR1250-201ENST00000408098 113 ntBASIC4.65□□□□□ -1.67
SSU72Q9NP77 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.65□□□□□ -1.67
SSU72Q9NP77 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.65□□□□□ -1.67
SSU72Q9NP77 AC139712.2-201ENST00000424302 339 ntBASIC4.65□□□□□ -1.67
SSU72Q9NP77 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.65□□□□□ -1.67
SSU72Q9NP77 RANP8-201ENST00000444720 713 ntBASIC4.65□□□□□ -1.67
SSU72Q9NP77 AL590399.6-201ENST00000446396 307 ntBASIC4.65□□□□□ -1.67
SSU72Q9NP77 RNU7-169P-201ENST00000459456 61 ntBASIC4.65□□□□□ -1.67
SSU72Q9NP77 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.65□□□□□ -1.67
SSU72Q9NP77 SNRPCP2-201ENST00000504370 475 ntBASIC4.65□□□□□ -1.67
SSU72Q9NP77 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.65□□□□□ -1.67
SSU72Q9NP77 Y_RNA.673-201ENST00000516306 88 ntBASIC4.65□□□□□ -1.67
SSU72Q9NP77 AC109329.1-201ENST00000518744 317 ntBASIC4.65□□□□□ -1.67
SSU72Q9NP77 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SSU72Q9NP77 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.65□□□□□ -1.67
SSU72Q9NP77 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.65□□□□□ -1.67
SSU72Q9NP77 MIR4691-201ENST00000583764 85 ntBASIC4.65□□□□□ -1.67
SSU72Q9NP77 AC022726.1-201ENST00000587475 207 ntBASIC4.65□□□□□ -1.67
SSU72Q9NP77 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.65□□□□□ -1.67
SSU72Q9NP77 VN1R91P-201ENST00000594377 169 ntBASIC4.65□□□□□ -1.67
SSU72Q9NP77 AC010201.1-201ENST00000605051 540 ntBASIC4.65□□□□□ -1.67
SSU72Q9NP77 MIR3976-201ENST00000606807 139 ntBASIC4.65□□□□□ -1.67
SSU72Q9NP77 AC015813.4-201ENST00000610469 179 ntBASIC4.65□□□□□ -1.67
SSU72Q9NP77 AC064801.1-201ENST00000612025 407 ntBASIC4.65□□□□□ -1.67
SSU72Q9NP77 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.65□□□□□ -1.67
SSU72Q9NP77 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.65□□□□□ -1.67
SSU72Q9NP77 SNORD39.4-201ENST00000620099 78 ntBASIC4.65□□□□□ -1.67
SSU72Q9NP77 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.65□□□□□ -1.67
SSU72Q9NP77 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.65□□□□□ -1.67
SSU72Q9NP77 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SSU72Q9NP77 AC027228.2-201ENST00000567141 2154 ntBASIC4.65□□□□□ -1.67
SSU72Q9NP77 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SSU72Q9NP77 AC099654.2-201ENST00000433031 1980 ntBASIC4.65□□□□□ -1.67
SSU72Q9NP77 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.65□□□□□ -1.67
SSU72Q9NP77 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SSU72Q9NP77 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SSU72Q9NP77 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
SSU72Q9NP77 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.64□□□□□ -1.67
SSU72Q9NP77 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.64□□□□□ -1.67
SSU72Q9NP77 NOL8P1-201ENST00000508336 3529 ntBASIC4.64□□□□□ -1.67
SSU72Q9NP77 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SSU72Q9NP77 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.64□□□□□ -1.67
SSU72Q9NP77 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
SSU72Q9NP77 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSU72Q9NP77 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSU72Q9NP77 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSU72Q9NP77 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSU72Q9NP77 SNORA20.1-201ENST00000364790 130 ntBASIC4.64□□□□□ -1.67
SSU72Q9NP77 Y_RNA.324-201ENST00000365165 102 ntBASIC4.64□□□□□ -1.67
SSU72Q9NP77 U3.30-201ENST00000391308 210 ntBASIC4.64□□□□□ -1.67
SSU72Q9NP77 GLULP6-201ENST00000399502 913 ntBASIC4.64□□□□□ -1.67
SSU72Q9NP77 U3.36-201ENST00000408418 213 ntBASIC4.64□□□□□ -1.67
SSU72Q9NP77 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.64□□□□□ -1.67
SSU72Q9NP77 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.64□□□□□ -1.67
SSU72Q9NP77 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.64□□□□□ -1.67
SSU72Q9NP77 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.64□□□□□ -1.67
SSU72Q9NP77 RPL26P6-201ENST00000440913 438 ntBASIC4.64□□□□□ -1.67
SSU72Q9NP77 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSU72Q9NP77 RPS3AP46-201ENST00000448352 682 ntBASIC4.64□□□□□ -1.67
SSU72Q9NP77 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.64□□□□□ -1.67
SSU72Q9NP77 HMGN2P13-201ENST00000476476 274 ntBASIC4.64□□□□□ -1.67
SSU72Q9NP77 AC007686.1-201ENST00000488511 463 ntBASIC4.64□□□□□ -1.67
SSU72Q9NP77 AC022493.1-201ENST00000492984 337 ntBASIC4.64□□□□□ -1.67
SSU72Q9NP77 OR51K1P-201ENST00000510214 950 ntBASIC4.64□□□□□ -1.67
SSU72Q9NP77 AC006499.6-201ENST00000511169 607 ntBASIC4.64□□□□□ -1.67
SSU72Q9NP77 NDUFB4P9-201ENST00000511646 388 ntBASIC4.64□□□□□ -1.67
SSU72Q9NP77 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms