Protein–RNA interactions for Protein: Q9HB31

SEBOX, Homeobox protein SEBOX, humanhuman

Predicted RBP Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEBOXQ9HB31 TRAV37-201ENST00000553906 342 ntBASIC3.18□□□□□ -1.9
SEBOXQ9HB31 HMGB1P33-201ENST00000563485 527 ntBASIC3.18□□□□□ -1.9
SEBOXQ9HB31 AC007224.1-201ENST00000564410 144 ntBASIC3.18□□□□□ -1.9
SEBOXQ9HB31 MIR4738-201ENST00000579134 87 ntBASIC3.18□□□□□ -1.9
SEBOXQ9HB31 AL606490.9-201ENST00000603331 271 ntBASIC3.18□□□□□ -1.9
SEBOXQ9HB31 AC107304.1-201ENST00000604229 296 ntBASIC3.18□□□□□ -1.9
SEBOXQ9HB31 Z84480.1-201ENST00000605131 311 ntBASIC3.18□□□□□ -1.9
SEBOXQ9HB31 U6atac.1-201ENST00000616025 117 ntBASIC3.18□□□□□ -1.9
SEBOXQ9HB31 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SEBOXQ9HB31 AL589994.2-201ENST00000621124 579 ntBASIC3.18□□□□□ -1.9
SEBOXQ9HB31 AC139792.3-201ENST00000623525 224 ntBASIC3.18□□□□□ -1.9
SEBOXQ9HB31 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SEBOXQ9HB31 AC007496.3-201ENST00000624987 3443 ntBASIC3.18□□□□□ -1.9
SEBOXQ9HB31 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SEBOXQ9HB31 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.18□□□□□ -1.9
SEBOXQ9HB31 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SEBOXQ9HB31 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SEBOXQ9HB31 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SEBOXQ9HB31 ZNF680P1-201ENST00000436625 1469 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SEBOXQ9HB31 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
SEBOXQ9HB31 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SEBOXQ9HB31 RNU6-1085P-201ENST00000363576 107 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
SEBOXQ9HB31 RNU6-946P-201ENST00000383878 107 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 RNU6-741P-201ENST00000383889 107 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 MIR493-201ENST00000385254 89 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 SNORA57.1-201ENST00000391227 145 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 HMGB3P20-201ENST00000417997 600 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 BX842559.1-201ENST00000419615 532 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 AL353193.1-201ENST00000421444 268 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 USP9YP18-201ENST00000425912 695 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 AC004975.1-201ENST00000428733 208 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.17□□□□□ -1.9
SEBOXQ9HB31 NDUFB4P6-201ENST00000436819 366 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 SETP5-201ENST00000437270 562 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 SNORA71B-202ENST00000439232 272 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 RPS15AP9-201ENST00000439856 381 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 NEFMP1-201ENST00000443423 1006 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 CBWD4P-201ENST00000445695 655 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.17□□□□□ -1.9
SEBOXQ9HB31 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SEBOXQ9HB31 RN7SL132P-201ENST00000478131 296 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 RPL31P60-201ENST00000478450 367 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 RPL21P129-201ENST00000491732 478 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.17□□□□□ -1.9
SEBOXQ9HB31 HMGB3P15-201ENST00000507326 574 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 AC009646.1-201ENST00000510455 318 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 MTCO1P35-201ENST00000515270 228 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 RN7SKP13-201ENST00000515933 244 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 RNA5SP380-201ENST00000517190 98 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.17□□□□□ -1.9
SEBOXQ9HB31 NDUFB9P3-201ENST00000521269 501 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.17□□□□□ -1.9
SEBOXQ9HB31 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.17□□□□□ -1.9
SEBOXQ9HB31 OR8R1P-201ENST00000543943 764 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.17□□□□□ -1.9
SEBOXQ9HB31 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.17□□□□□ -1.9
SEBOXQ9HB31 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.17□□□□□ -1.9
SEBOXQ9HB31 AC120057.2-201ENST00000571520 271 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 MIR4286-201ENST00000580651 93 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 AC024619.4-201ENST00000580924 316 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 AC053481.4-201ENST00000583164 216 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.17□□□□□ -1.9
SEBOXQ9HB31 MIR5187-201ENST00000583479 76 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 AC093227.2-201ENST00000589357 285 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 AC002545.1-201ENST00000592511 181 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 AC104763.2-201ENST00000604179 382 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 AC013553.2-201ENST00000604244 589 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 AC007619.2-201ENST00000605743 379 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 AC034102.8-201ENST00000615146 484 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SEBOXQ9HB31 AC093648.1-201ENST00000623546 606 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 AC068724.3-201ENST00000625906 87 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SEBOXQ9HB31 AC007256.1-201ENST00000392253 2765 ntBASIC3.17□□□□□ -1.9
SEBOXQ9HB31 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SEBOXQ9HB31 AC058791.1-201ENST00000608412 3198 ntBASIC3.16□□□□□ -1.9
SEBOXQ9HB31 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
SEBOXQ9HB31 MTND5P27-201ENST00000428871 1720 ntBASIC3.16□□□□□ -1.9
SEBOXQ9HB31 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SEBOXQ9HB31 AL021368.2-201ENST00000606125 5352 ntBASIC3.16□□□□□ -1.9
SEBOXQ9HB31 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SEBOXQ9HB31 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SEBOXQ9HB31 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
SEBOXQ9HB31 Y_RNA.9-201ENST00000362354 101 ntBASIC3.16□□□□□ -1.9
SEBOXQ9HB31 RNA5SP295-201ENST00000362655 121 ntBASIC3.16□□□□□ -1.9
SEBOXQ9HB31 RNU6-179P-201ENST00000363350 107 ntBASIC3.16□□□□□ -1.9
SEBOXQ9HB31 RNU6-1322P-201ENST00000364309 107 ntBASIC3.16□□□□□ -1.9
SEBOXQ9HB31 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SEBOXQ9HB31 RNU6-14P-201ENST00000384630 106 ntBASIC3.16□□□□□ -1.9
SEBOXQ9HB31 AP000567.1-201ENST00000406413 156 ntBASIC3.16□□□□□ -1.9
SEBOXQ9HB31 RN7SKP263-201ENST00000411194 309 ntBASIC3.16□□□□□ -1.9
SEBOXQ9HB31 RNU6-387P-201ENST00000411331 105 ntBASIC3.16□□□□□ -1.9
SEBOXQ9HB31 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SEBOXQ9HB31 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.16□□□□□ -1.9
SEBOXQ9HB31 OR51A5P-201ENST00000415429 942 ntBASIC3.16□□□□□ -1.9
SEBOXQ9HB31 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.16□□□□□ -1.9
SEBOXQ9HB31 SDCBPP3-201ENST00000419629 891 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms