Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
UBE2OQ9C0C9 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UBE2OQ9C0C9 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
UBE2OQ9C0C9 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
UBE2OQ9C0C9 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
UBE2OQ9C0C9 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
UBE2OQ9C0C9 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UBE2OQ9C0C9 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
UBE2OQ9C0C9 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 RNU6-1303P-201ENST00000364841 107 ntBASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 RNU6-596P-201ENST00000365395 98 ntBASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 RNU6-1329P-201ENST00000365664 107 ntBASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 RNU6-338P-201ENST00000383888 105 ntBASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 Y_RNA.526-201ENST00000384572 110 ntBASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 MIR1271-201ENST00000408537 86 ntBASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 RN7SKP202-201ENST00000410439 330 ntBASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 COX6CP13-201ENST00000428703 226 ntBASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 AL162389.1-201ENST00000449233 177 ntBASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 LINC01399-202ENST00000458450 244 ntBASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 RN7SL441P-201ENST00000492388 296 ntBASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 Y_RNA.689-201ENST00000516589 107 ntBASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 HMGN1P28-201ENST00000521340 364 ntBASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 AC022726.1-201ENST00000587475 207 ntBASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 VN1R91P-201ENST00000594377 169 ntBASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 AC012119.1-201ENST00000603184 222 ntBASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 AC091979.2-201ENST00000607514 214 ntBASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 AC123768.4-201ENST00000616244 701 ntBASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 AL445567.2-201ENST00000618935 498 ntBASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 AL159153.1-201ENST00000619688 317 ntBASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 AP005019.3-201ENST00000620418 560 ntBASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 RNA5SP196-201ENST00000625967 102 ntBASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 RAD17P1-201ENST00000418130 2042 ntBASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
UBE2OQ9C0C9 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 STX3-208ENST00000641815 3236 ntBASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 Y_RNA.29-201ENST00000362570 113 ntBASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 Y_RNA.105-201ENST00000363182 111 ntBASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 SNORD27-201ENST00000363981 72 ntBASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 RNVU1-3-201ENST00000364313 161 ntBASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 RNU4-50P-201ENST00000364361 141 ntBASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 Y_RNA.333-201ENST00000365274 102 ntBASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 SNORA51.11-201ENST00000384442 131 ntBASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 MIR554-201ENST00000384874 96 ntBASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 MIR548H3-201ENST00000408771 118 ntBASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 AP000275.1-201ENST00000411943 390 ntBASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 RPS12P5-201ENST00000423449 371 ntBASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 OR4C10P-201ENST00000434991 931 ntBASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 OR2AQ1P-201ENST00000451972 200 ntBASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 SCARNA13-201ENST00000516672 275 ntBASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 IGLVIV-53-201ENST00000520107 367 ntBASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 AC022884.2-201ENST00000578535 580 ntBASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 AC064801.1-201ENST00000612025 407 ntBASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 AC004792.1-201ENST00000614523 137 ntBASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 AC126323.6-202ENST00000568092 3511 ntBASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 SMG1P4-204ENST00000523028 4131 ntBASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
UBE2OQ9C0C9 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
UBE2OQ9C0C9 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
UBE2OQ9C0C9 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.27□□□□□ -1.57
UBE2OQ9C0C9 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
UBE2OQ9C0C9 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
UBE2OQ9C0C9 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
UBE2OQ9C0C9 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
UBE2OQ9C0C9 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UBE2OQ9C0C9 MIR208A-201ENST00000362287 71 ntBASIC5.27□□□□□ -1.57
UBE2OQ9C0C9 Y_RNA.48-201ENST00000362710 103 ntBASIC5.27□□□□□ -1.57
UBE2OQ9C0C9 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
UBE2OQ9C0C9 RNU6-190P-201ENST00000384154 102 ntBASIC5.27□□□□□ -1.57
UBE2OQ9C0C9 RNU6-45P-201ENST00000384471 107 ntBASIC5.27□□□□□ -1.57
UBE2OQ9C0C9 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UBE2OQ9C0C9 RNU6-628P-201ENST00000410675 107 ntBASIC5.27□□□□□ -1.57
UBE2OQ9C0C9 RPL7AP25-201ENST00000423357 805 ntBASIC5.27□□□□□ -1.57
UBE2OQ9C0C9 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC5.27□□□□□ -1.57
UBE2OQ9C0C9 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.27□□□□□ -1.57
UBE2OQ9C0C9 CEACAMP1-201ENST00000434624 1035 ntBASIC5.27□□□□□ -1.57
UBE2OQ9C0C9 RPL23AP83-201ENST00000434984 473 ntBASIC5.27□□□□□ -1.57
UBE2OQ9C0C9 AC008264.1-201ENST00000447612 367 ntBASIC5.27□□□□□ -1.57
UBE2OQ9C0C9 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.27□□□□□ -1.57
UBE2OQ9C0C9 PCMTD1P1-201ENST00000455560 355 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms