Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.51□□□□□ -1.85
SKA1Q96BD8 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.51□□□□□ -1.85
SKA1Q96BD8 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.51□□□□□ -1.85
SKA1Q96BD8 BX510359.1-201ENST00000456973 237 ntBASIC3.51□□□□□ -1.85
SKA1Q96BD8 MRPS17P3-201ENST00000465453 385 ntBASIC3.51□□□□□ -1.85
SKA1Q96BD8 AC109486.1-201ENST00000486833 374 ntBASIC3.51□□□□□ -1.85
SKA1Q96BD8 AP000563.1-201ENST00000490865 758 ntBASIC3.51□□□□□ -1.85
SKA1Q96BD8 RNA5SP380-201ENST00000517190 98 ntBASIC3.51□□□□□ -1.85
SKA1Q96BD8 AP006587.4-201ENST00000526053 529 ntBASIC3.51□□□□□ -1.85
SKA1Q96BD8 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.51□□□□□ -1.85
SKA1Q96BD8 MRPS36P5-201ENST00000551909 298 ntBASIC3.51□□□□□ -1.85
SKA1Q96BD8 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.51□□□□□ -1.85
SKA1Q96BD8 AL157394.1-201ENST00000562983 1224 ntBASIC3.51□□□□□ -1.85
SKA1Q96BD8 AC010653.1-201ENST00000571108 881 ntBASIC3.51□□□□□ -1.85
SKA1Q96BD8 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.51□□□□□ -1.85
SKA1Q96BD8 AL035413.2-201ENST00000604801 525 ntBASIC3.51□□□□□ -1.85
SKA1Q96BD8 AL031775.1-201ENST00000607014 887 ntBASIC3.51□□□□□ -1.85
SKA1Q96BD8 AC138749.5-201ENST00000611461 208 ntBASIC3.51□□□□□ -1.85
SKA1Q96BD8 AC116165.2-201ENST00000616705 206 ntBASIC3.51□□□□□ -1.85
SKA1Q96BD8 AC092140.2-201ENST00000618027 521 ntBASIC3.51□□□□□ -1.85
SKA1Q96BD8 AC120349.3-201ENST00000624377 529 ntBASIC3.51□□□□□ -1.85
SKA1Q96BD8 AC007494.3-201ENST00000624660 743 ntBASIC3.51□□□□□ -1.85
SKA1Q96BD8 MIR3651-201ENST00000630427 90 ntBASIC3.51□□□□□ -1.85
SKA1Q96BD8 MFSD8-233ENST00000641482 4860 ntBASIC3.51□□□□□ -1.85
SKA1Q96BD8 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
SKA1Q96BD8 ZNF519P1-201ENST00000449011 1626 ntBASIC3.51□□□□□ -1.85
SKA1Q96BD8 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.51□□□□□ -1.85
SKA1Q96BD8 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.51□□□□□ -1.85
SKA1Q96BD8 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SKA1Q96BD8 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SKA1Q96BD8 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SKA1Q96BD8 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SKA1Q96BD8 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
SKA1Q96BD8 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SKA1Q96BD8 Y_RNA.169-201ENST00000363745 96 ntBASIC3.5□□□□□ -1.85
SKA1Q96BD8 AL021407.1-201ENST00000404531 386 ntBASIC3.5□□□□□ -1.85
SKA1Q96BD8 NDUFB4P4-201ENST00000404822 243 ntBASIC3.5□□□□□ -1.85
SKA1Q96BD8 RNU2-68P-201ENST00000410878 191 ntBASIC3.5□□□□□ -1.85
SKA1Q96BD8 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.5□□□□□ -1.85
SKA1Q96BD8 AL353678.1-201ENST00000422735 741 ntBASIC3.5□□□□□ -1.85
SKA1Q96BD8 AC137499.1-201ENST00000427602 88 ntBASIC3.5□□□□□ -1.85
SKA1Q96BD8 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.5□□□□□ -1.85
SKA1Q96BD8 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.5□□□□□ -1.85
SKA1Q96BD8 AC119618.1-201ENST00000434191 222 ntBASIC3.5□□□□□ -1.85
SKA1Q96BD8 RPL23AP22-201ENST00000437556 453 ntBASIC3.5□□□□□ -1.85
SKA1Q96BD8 AC006028.1-201ENST00000438379 402 ntBASIC3.5□□□□□ -1.85
SKA1Q96BD8 AC097262.1-201ENST00000452559 548 ntBASIC3.5□□□□□ -1.85
SKA1Q96BD8 CECR9-201ENST00000453421 199 ntBASIC3.5□□□□□ -1.85
SKA1Q96BD8 RNU6-953P-201ENST00000459154 107 ntBASIC3.5□□□□□ -1.85
SKA1Q96BD8 RPS3AP43-201ENST00000479743 781 ntBASIC3.5□□□□□ -1.85
SKA1Q96BD8 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.5□□□□□ -1.85
SKA1Q96BD8 RN7SKP57-201ENST00000517248 293 ntBASIC3.5□□□□□ -1.85
SKA1Q96BD8 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.5□□□□□ -1.85
SKA1Q96BD8 AC022878.1-201ENST00000530684 149 ntBASIC3.5□□□□□ -1.85
SKA1Q96BD8 AP000889.1-201ENST00000530968 660 ntBASIC3.5□□□□□ -1.85
SKA1Q96BD8 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.5□□□□□ -1.85
SKA1Q96BD8 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.5□□□□□ -1.85
SKA1Q96BD8 ROCK1P1-201ENST00000573767 549 ntBASIC3.5□□□□□ -1.85
SKA1Q96BD8 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.5□□□□□ -1.85
SKA1Q96BD8 HMGN2P15-201ENST00000585707 270 ntBASIC3.5□□□□□ -1.85
SKA1Q96BD8 AC112191.3-201ENST00000604371 277 ntBASIC3.5□□□□□ -1.85
SKA1Q96BD8 AC004832.5-201ENST00000608677 401 ntBASIC3.5□□□□□ -1.85
SKA1Q96BD8 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.5□□□□□ -1.85
SKA1Q96BD8 MTND4P4-201ENST00000439033 1366 ntBASIC3.5□□□□□ -1.85
SKA1Q96BD8 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SKA1Q96BD8 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SKA1Q96BD8 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SKA1Q96BD8 RNU4-35P-201ENST00000362588 141 ntBASIC3.49□□□□□ -1.85
SKA1Q96BD8 RNU6-511P-201ENST00000363496 107 ntBASIC3.49□□□□□ -1.85
SKA1Q96BD8 RNU6-817P-201ENST00000391083 104 ntBASIC3.49□□□□□ -1.85
SKA1Q96BD8 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.49□□□□□ -1.85
SKA1Q96BD8 RN7SKP111-201ENST00000410349 271 ntBASIC3.49□□□□□ -1.85
SKA1Q96BD8 SEPT2P1-201ENST00000419651 180 ntBASIC3.49□□□□□ -1.85
SKA1Q96BD8 AL356583.2-201ENST00000426536 280 ntBASIC3.49□□□□□ -1.85
SKA1Q96BD8 ATP5JP1-201ENST00000431631 322 ntBASIC3.49□□□□□ -1.85
SKA1Q96BD8 AC098826.2-201ENST00000452011 651 ntBASIC3.49□□□□□ -1.85
SKA1Q96BD8 MTCO2P6-201ENST00000463134 685 ntBASIC3.49□□□□□ -1.85
SKA1Q96BD8 AC025518.1-201ENST00000479856 347 ntBASIC3.49□□□□□ -1.85
SKA1Q96BD8 RPL36AP51-201ENST00000487216 318 ntBASIC3.49□□□□□ -1.85
SKA1Q96BD8 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.49□□□□□ -1.85
SKA1Q96BD8 FCF1P8-201ENST00000510322 597 ntBASIC3.49□□□□□ -1.85
SKA1Q96BD8 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
SKA1Q96BD8 SCARNA13-201ENST00000516672 275 ntBASIC3.49□□□□□ -1.85
SKA1Q96BD8 RNA5SP471-201ENST00000516971 106 ntBASIC3.49□□□□□ -1.85
SKA1Q96BD8 AC022634.1-201ENST00000520765 532 ntBASIC3.49□□□□□ -1.85
SKA1Q96BD8 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.49□□□□□ -1.85
SKA1Q96BD8 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.49□□□□□ -1.85
SKA1Q96BD8 AC025281.1-201ENST00000567026 265 ntBASIC3.49□□□□□ -1.85
SKA1Q96BD8 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SKA1Q96BD8 MIR3915-201ENST00000578518 97 ntBASIC3.49□□□□□ -1.85
SKA1Q96BD8 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.49□□□□□ -1.85
SKA1Q96BD8 AC020895.1-201ENST00000595362 272 ntBASIC3.49□□□□□ -1.85
SKA1Q96BD8 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.49□□□□□ -1.85
SKA1Q96BD8 AL355877.2-201ENST00000603670 358 ntBASIC3.49□□□□□ -1.85
SKA1Q96BD8 MTND4LP5-201ENST00000605152 292 ntBASIC3.49□□□□□ -1.85
SKA1Q96BD8 AC005000.2-201ENST00000605468 310 ntBASIC3.49□□□□□ -1.85
SKA1Q96BD8 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.49□□□□□ -1.85
SKA1Q96BD8 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SKA1Q96BD8 UCA1.1-201ENST00000620952 75 ntBASIC3.49□□□□□ -1.85
SKA1Q96BD8 AC099506.2-201ENST00000623074 221 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms