Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-CQ95604 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-CQ95604 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-CQ95604 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-CQ95604 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
HLA-CQ95604 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
HLA-CQ95604 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-CQ95604 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
HLA-CQ95604 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-CQ95604 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-CQ95604 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
HLA-CQ95604 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-CQ95604 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
HLA-CQ95604 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-CQ95604 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-CQ95604 RNU6-1074P-201ENST00000383995 104 ntBASIC5.6□□□□□ -1.51
HLA-CQ95604 MIR153-2-201ENST00000385225 87 ntBASIC5.6□□□□□ -1.51
HLA-CQ95604 RNU6-1168P-201ENST00000390831 104 ntBASIC5.6□□□□□ -1.51
HLA-CQ95604 EIF1AXP1-201ENST00000419267 435 ntBASIC5.6□□□□□ -1.51
HLA-CQ95604 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-CQ95604 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.6□□□□□ -1.51
HLA-CQ95604 H3F3BP1-201ENST00000440551 403 ntBASIC5.6□□□□□ -1.51
HLA-CQ95604 RN7SKP49-201ENST00000516675 260 ntBASIC5.6□□□□□ -1.51
HLA-CQ95604 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.6□□□□□ -1.51
HLA-CQ95604 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.6□□□□□ -1.51
HLA-CQ95604 AL161713.1-201ENST00000555538 145 ntBASIC5.6□□□□□ -1.51
HLA-CQ95604 AC010928.2-201ENST00000588017 287 ntBASIC5.6□□□□□ -1.51
HLA-CQ95604 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-CQ95604 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
HLA-CQ95604 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
HLA-CQ95604 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-CQ95604 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.6□□□□□ -1.51
HLA-CQ95604 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
HLA-CQ95604 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
HLA-CQ95604 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-CQ95604 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-CQ95604 RAD17P1-201ENST00000418130 2042 ntBASIC5.6□□□□□ -1.51
HLA-CQ95604 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
HLA-CQ95604 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-CQ95604 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-CQ95604 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-CQ95604 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-CQ95604 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-CQ95604 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-CQ95604 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-CQ95604 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.59□□□□□ -1.51
HLA-CQ95604 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HLA-CQ95604 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
HLA-CQ95604 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
HLA-CQ95604 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
HLA-CQ95604 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.59□□□□□ -1.51
HLA-CQ95604 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
HLA-CQ95604 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
HLA-CQ95604 RNU6-222P-201ENST00000362438 107 ntBASIC5.59□□□□□ -1.51
HLA-CQ95604 RNU6-249P-201ENST00000363016 102 ntBASIC5.59□□□□□ -1.51
HLA-CQ95604 RNU6-879P-201ENST00000364328 108 ntBASIC5.59□□□□□ -1.51
HLA-CQ95604 Y_RNA.245-201ENST00000364493 95 ntBASIC5.59□□□□□ -1.51
HLA-CQ95604 RNA5SP479-201ENST00000364858 117 ntBASIC5.59□□□□□ -1.51
HLA-CQ95604 RN7SKP186-201ENST00000365371 303 ntBASIC5.59□□□□□ -1.51
HLA-CQ95604 RNU6-968P-201ENST00000384076 107 ntBASIC5.59□□□□□ -1.51
HLA-CQ95604 RNU6-651P-201ENST00000411040 105 ntBASIC5.59□□□□□ -1.51
HLA-CQ95604 AC117440.1-201ENST00000474107 571 ntBASIC5.59□□□□□ -1.51
HLA-CQ95604 RPL30P1-201ENST00000488676 339 ntBASIC5.59□□□□□ -1.51
HLA-CQ95604 RPL23AP75-201ENST00000491601 451 ntBASIC5.59□□□□□ -1.51
HLA-CQ95604 AC140172.1-201ENST00000502928 141 ntBASIC5.59□□□□□ -1.51
HLA-CQ95604 AC006427.1-201ENST00000514359 712 ntBASIC5.59□□□□□ -1.51
HLA-CQ95604 RNU6-1219P-201ENST00000516143 112 ntBASIC5.59□□□□□ -1.51
HLA-CQ95604 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-CQ95604 AC091042.1-201ENST00000579213 173 ntBASIC5.59□□□□□ -1.51
HLA-CQ95604 MIR4691-201ENST00000583764 85 ntBASIC5.59□□□□□ -1.51
HLA-CQ95604 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.59□□□□□ -1.51
HLA-CQ95604 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-CQ95604 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-CQ95604 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-CQ95604 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-CQ95604 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC5.59□□□□□ -1.52
HLA-CQ95604 AC009962.1-201ENST00000567327 3813 ntBASIC5.59□□□□□ -1.52
HLA-CQ95604 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.59□□□□□ -1.52
HLA-CQ95604 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.59□□□□□ -1.52
HLA-CQ95604 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
HLA-CQ95604 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-CQ95604 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-CQ95604 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-CQ95604 AC092070.2-203ENST00000598377 3644 ntBASIC5.58□□□□□ -1.52
HLA-CQ95604 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.58□□□□□ -1.52
HLA-CQ95604 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-CQ95604 Y_RNA.262-201ENST00000364641 102 ntBASIC5.58□□□□□ -1.52
HLA-CQ95604 Y_RNA.418-201ENST00000384029 102 ntBASIC5.58□□□□□ -1.52
HLA-CQ95604 RNU6-166P-201ENST00000384371 107 ntBASIC5.58□□□□□ -1.52
HLA-CQ95604 RNU6-1289P-201ENST00000384431 106 ntBASIC5.58□□□□□ -1.52
HLA-CQ95604 Y_RNA.570-201ENST00000384750 101 ntBASIC5.58□□□□□ -1.52
HLA-CQ95604 RNA5SP91-201ENST00000390902 119 ntBASIC5.58□□□□□ -1.52
HLA-CQ95604 RNA5SP213-201ENST00000391031 106 ntBASIC5.58□□□□□ -1.52
HLA-CQ95604 SNORD12B-201ENST00000410433 91 ntBASIC5.58□□□□□ -1.52
HLA-CQ95604 AC079809.1-201ENST00000415468 276 ntBASIC5.58□□□□□ -1.52
HLA-CQ95604 RNF10P1-201ENST00000418589 369 ntBASIC5.58□□□□□ -1.52
HLA-CQ95604 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.58□□□□□ -1.52
HLA-CQ95604 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-CQ95604 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-CQ95604 AC074133.1-201ENST00000515696 183 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms