Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
STAG1Q8WVM7 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
STAG1Q8WVM7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
STAG1Q8WVM7 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
STAG1Q8WVM7 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
STAG1Q8WVM7 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
STAG1Q8WVM7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.33□□□□□ -1.72
STAG1Q8WVM7 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
STAG1Q8WVM7 RNU6-1167P-201ENST00000363227 94 ntBASIC4.33□□□□□ -1.72
STAG1Q8WVM7 RNU4-48P-201ENST00000365559 182 ntBASIC4.33□□□□□ -1.72
STAG1Q8WVM7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.33□□□□□ -1.72
STAG1Q8WVM7 MIR181A1-201ENST00000385026 110 ntBASIC4.33□□□□□ -1.72
STAG1Q8WVM7 MIR454-201ENST00000390180 115 ntBASIC4.33□□□□□ -1.72
STAG1Q8WVM7 HSPE1P8-201ENST00000406997 288 ntBASIC4.33□□□□□ -1.72
STAG1Q8WVM7 AC093578.1-201ENST00000415219 368 ntBASIC4.33□□□□□ -1.72
STAG1Q8WVM7 Z85995.1-201ENST00000415547 335 ntBASIC4.33□□□□□ -1.72
STAG1Q8WVM7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.33□□□□□ -1.72
STAG1Q8WVM7 AC007919.1-201ENST00000429380 217 ntBASIC4.33□□□□□ -1.72
STAG1Q8WVM7 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.33□□□□□ -1.72
STAG1Q8WVM7 MTATP6P30-201ENST00000443540 664 ntBASIC4.33□□□□□ -1.72
STAG1Q8WVM7 RPL23AP20-201ENST00000447965 421 ntBASIC4.33□□□□□ -1.72
STAG1Q8WVM7 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.33□□□□□ -1.72
STAG1Q8WVM7 SSXP4-201ENST00000451349 245 ntBASIC4.33□□□□□ -1.72
STAG1Q8WVM7 RNU7-182P-201ENST00000459009 62 ntBASIC4.33□□□□□ -1.72
STAG1Q8WVM7 RN7SL93P-201ENST00000463035 293 ntBASIC4.33□□□□□ -1.72
STAG1Q8WVM7 TRBV1-201ENST00000476502 284 ntBASIC4.33□□□□□ -1.72
STAG1Q8WVM7 RPS15AP34-201ENST00000487776 387 ntBASIC4.33□□□□□ -1.72
STAG1Q8WVM7 RPL39P36-201ENST00000490784 156 ntBASIC4.33□□□□□ -1.72
STAG1Q8WVM7 AC104619.4-201ENST00000510773 249 ntBASIC4.33□□□□□ -1.72
STAG1Q8WVM7 RNA5SP290-201ENST00000517133 127 ntBASIC4.33□□□□□ -1.72
STAG1Q8WVM7 ADI1P3-201ENST00000549509 470 ntBASIC4.33□□□□□ -1.72
STAG1Q8WVM7 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.33□□□□□ -1.72
STAG1Q8WVM7 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.33□□□□□ -1.72
STAG1Q8WVM7 MIR3609-201ENST00000582661 80 ntBASIC4.33□□□□□ -1.72
STAG1Q8WVM7 BNIP3P9-201ENST00000603714 553 ntBASIC4.33□□□□□ -1.72
STAG1Q8WVM7 OR5H6-203ENST00000642105 978 ntBASIC4.33□□□□□ -1.72
STAG1Q8WVM7 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.33□□□□□ -1.72
STAG1Q8WVM7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
STAG1Q8WVM7 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
STAG1Q8WVM7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
STAG1Q8WVM7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
STAG1Q8WVM7 NCAPGP1-201ENST00000505112 1814 ntBASIC4.32□□□□□ -1.72
STAG1Q8WVM7 AC007256.1-201ENST00000392253 2765 ntBASIC4.32□□□□□ -1.72
STAG1Q8WVM7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
STAG1Q8WVM7 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
STAG1Q8WVM7 RNU6-282P-201ENST00000365357 103 ntBASIC4.32□□□□□ -1.72
STAG1Q8WVM7 RNA5SP44-201ENST00000410446 133 ntBASIC4.32□□□□□ -1.72
STAG1Q8WVM7 YME1L1P1-201ENST00000429435 297 ntBASIC4.32□□□□□ -1.72
STAG1Q8WVM7 AC092573.2-201ENST00000434546 243 ntBASIC4.32□□□□□ -1.72
STAG1Q8WVM7 PIGFP3-201ENST00000441918 722 ntBASIC4.32□□□□□ -1.72
STAG1Q8WVM7 RPS3AP46-201ENST00000448352 682 ntBASIC4.32□□□□□ -1.72
STAG1Q8WVM7 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.32□□□□□ -1.72
STAG1Q8WVM7 AC093899.1-201ENST00000457984 376 ntBASIC4.32□□□□□ -1.72
STAG1Q8WVM7 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.32□□□□□ -1.72
STAG1Q8WVM7 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.32□□□□□ -1.72
STAG1Q8WVM7 RN7SKP18-201ENST00000516005 275 ntBASIC4.32□□□□□ -1.72
STAG1Q8WVM7 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.32□□□□□ -1.72
STAG1Q8WVM7 AP001893.2-201ENST00000526949 202 ntBASIC4.32□□□□□ -1.72
STAG1Q8WVM7 FAM92A1P1-201ENST00000528023 890 ntBASIC4.32□□□□□ -1.72
STAG1Q8WVM7 OR5BN1P-201ENST00000532955 829 ntBASIC4.32□□□□□ -1.72
STAG1Q8WVM7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.32□□□□□ -1.72
STAG1Q8WVM7 AC008536.2-201ENST00000607284 349 ntBASIC4.32□□□□□ -1.72
STAG1Q8WVM7 MIR6863-201ENST00000636112 90 ntBASIC4.32□□□□□ -1.72
STAG1Q8WVM7 MTND5P42-201ENST00000637720 498 ntBASIC4.32□□□□□ -1.72
STAG1Q8WVM7 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
STAG1Q8WVM7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.32□□□□□ -1.72
STAG1Q8WVM7 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.32□□□□□ -1.72
STAG1Q8WVM7 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.31□□□□□ -1.72
STAG1Q8WVM7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
STAG1Q8WVM7 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
STAG1Q8WVM7 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
STAG1Q8WVM7 SMIM11P1-201ENST00000369586 178 ntBASIC4.31□□□□□ -1.72
STAG1Q8WVM7 Y_RNA.505-201ENST00000384489 102 ntBASIC4.31□□□□□ -1.72
STAG1Q8WVM7 MIR301A-201ENST00000385261 86 ntBASIC4.31□□□□□ -1.72
STAG1Q8WVM7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
STAG1Q8WVM7 MTHFD2P2-201ENST00000407725 247 ntBASIC4.31□□□□□ -1.72
STAG1Q8WVM7 AL109913.1-201ENST00000421173 514 ntBASIC4.31□□□□□ -1.72
STAG1Q8WVM7 RPL23AP30-201ENST00000432419 501 ntBASIC4.31□□□□□ -1.72
STAG1Q8WVM7 HSPD1P21-201ENST00000436541 245 ntBASIC4.31□□□□□ -1.72
STAG1Q8WVM7 DPPA3P1-201ENST00000448050 469 ntBASIC4.31□□□□□ -1.72
STAG1Q8WVM7 FABP5P13-201ENST00000452144 328 ntBASIC4.31□□□□□ -1.72
STAG1Q8WVM7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.31□□□□□ -1.72
STAG1Q8WVM7 SRRM1P2-201ENST00000464531 1192 ntBASIC4.31□□□□□ -1.72
STAG1Q8WVM7 GMFBP1-201ENST00000467831 427 ntBASIC4.31□□□□□ -1.72
STAG1Q8WVM7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.31□□□□□ -1.72
STAG1Q8WVM7 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.31□□□□□ -1.72
STAG1Q8WVM7 AC105417.1-201ENST00000514691 285 ntBASIC4.31□□□□□ -1.72
STAG1Q8WVM7 SNORD27.1-201ENST00000516319 72 ntBASIC4.31□□□□□ -1.72
STAG1Q8WVM7 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.31□□□□□ -1.72
STAG1Q8WVM7 RANP3-201ENST00000530970 276 ntBASIC4.31□□□□□ -1.72
STAG1Q8WVM7 AL512310.1-201ENST00000548639 172 ntBASIC4.31□□□□□ -1.72
STAG1Q8WVM7 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.31□□□□□ -1.72
STAG1Q8WVM7 AC007363.1-201ENST00000604736 620 ntBASIC4.31□□□□□ -1.72
STAG1Q8WVM7 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
STAG1Q8WVM7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.31□□□□□ -1.72
STAG1Q8WVM7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
STAG1Q8WVM7 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
STAG1Q8WVM7 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.3□□□□□ -1.72
STAG1Q8WVM7 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.3□□□□□ -1.72
STAG1Q8WVM7 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms