Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC89Q8N998 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC89Q8N998 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC89Q8N998 RN7SL75P-201ENST00000461926 281 ntBASIC3.28□□□□□ -1.88
CCDC89Q8N998 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC89Q8N998 AC112204.1-201ENST00000502591 103 ntBASIC3.28□□□□□ -1.88
CCDC89Q8N998 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.28□□□□□ -1.88
CCDC89Q8N998 RNA5SP385-201ENST00000515947 110 ntBASIC3.28□□□□□ -1.88
CCDC89Q8N998 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC89Q8N998 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC89Q8N998 H3F3AP1-201ENST00000559984 334 ntBASIC3.28□□□□□ -1.88
CCDC89Q8N998 AC007151.1-201ENST00000572774 483 ntBASIC3.28□□□□□ -1.88
CCDC89Q8N998 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC89Q8N998 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC89Q8N998 uc_338.25-201ENST00000613756 156 ntBASIC3.28□□□□□ -1.88
CCDC89Q8N998 AC068057.2-201ENST00000624047 895 ntBASIC3.28□□□□□ -1.88
CCDC89Q8N998 AC093591.3-201ENST00000634516 308 ntBASIC3.28□□□□□ -1.88
CCDC89Q8N998 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CCDC89Q8N998 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC89Q8N998 AC008264.2-201ENST00000610193 3731 ntBASIC3.28□□□□□ -1.88
CCDC89Q8N998 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC89Q8N998 AC010889.1-201ENST00000566193 2666 ntBASIC3.27□□□□□ -1.89
CCDC89Q8N998 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC89Q8N998 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC89Q8N998 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC89Q8N998 AC093831.2-201ENST00000624393 3427 ntBASIC3.27□□□□□ -1.89
CCDC89Q8N998 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC89Q8N998 U8.9-201ENST00000365667 134 ntBASIC3.27□□□□□ -1.89
CCDC89Q8N998 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC89Q8N998 MIR887-201ENST00000401258 79 ntBASIC3.27□□□□□ -1.89
CCDC89Q8N998 AL356057.2-201ENST00000403318 432 ntBASIC3.27□□□□□ -1.89
CCDC89Q8N998 RPL19P1-201ENST00000411635 428 ntBASIC3.27□□□□□ -1.89
CCDC89Q8N998 AL389915.1-201ENST00000422463 466 ntBASIC3.27□□□□□ -1.89
CCDC89Q8N998 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC89Q8N998 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC89Q8N998 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC89Q8N998 NANOGNBP1-201ENST00000448444 480 ntBASIC3.27□□□□□ -1.89
CCDC89Q8N998 MTATP6P7-201ENST00000453315 681 ntBASIC3.27□□□□□ -1.89
CCDC89Q8N998 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC89Q8N998 AC107626.1-201ENST00000471084 183 ntBASIC3.27□□□□□ -1.89
CCDC89Q8N998 RN7SL432P-201ENST00000484057 298 ntBASIC3.27□□□□□ -1.89
CCDC89Q8N998 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CCDC89Q8N998 AC098591.2-201ENST00000510152 315 ntBASIC3.27□□□□□ -1.89
CCDC89Q8N998 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC89Q8N998 RPPH1-2P-201ENST00000516688 293 ntBASIC3.27□□□□□ -1.89
CCDC89Q8N998 RNU6-143P-201ENST00000516942 93 ntBASIC3.27□□□□□ -1.89
CCDC89Q8N998 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC89Q8N998 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.27□□□□□ -1.89
CCDC89Q8N998 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC89Q8N998 AC011611.1-201ENST00000552179 197 ntBASIC3.27□□□□□ -1.89
CCDC89Q8N998 AC091489.2-201ENST00000566263 604 ntBASIC3.27□□□□□ -1.89
CCDC89Q8N998 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC89Q8N998 RPL23AP88-201ENST00000605759 454 ntBASIC3.27□□□□□ -1.89
CCDC89Q8N998 AL391813.2-201ENST00000609113 322 ntBASIC3.27□□□□□ -1.89
CCDC89Q8N998 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.27□□□□□ -1.89
CCDC89Q8N998 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.27□□□□□ -1.89
CCDC89Q8N998 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC89Q8N998 AC007998.5-201ENST00000622938 237 ntBASIC3.27□□□□□ -1.89
CCDC89Q8N998 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC89Q8N998 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC89Q8N998 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC89Q8N998 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CCDC89Q8N998 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC89Q8N998 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CCDC89Q8N998 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.26□□□□□ -1.89
CCDC89Q8N998 RNU6-500P-201ENST00000362349 107 ntBASIC3.26□□□□□ -1.89
CCDC89Q8N998 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC89Q8N998 RNU6-817P-201ENST00000391083 104 ntBASIC3.26□□□□□ -1.89
CCDC89Q8N998 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC89Q8N998 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.26□□□□□ -1.89
CCDC89Q8N998 RPS3AP25-201ENST00000411660 793 ntBASIC3.26□□□□□ -1.89
CCDC89Q8N998 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC89Q8N998 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC89Q8N998 AL353729.1-201ENST00000425044 720 ntBASIC3.26□□□□□ -1.89
CCDC89Q8N998 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC89Q8N998 AC244505.4-201ENST00000434905 287 ntBASIC3.26□□□□□ -1.89
CCDC89Q8N998 AC005019.1-201ENST00000436455 431 ntBASIC3.26□□□□□ -1.89
CCDC89Q8N998 AC093156.1-201ENST00000440382 670 ntBASIC3.26□□□□□ -1.89
CCDC89Q8N998 MTND4P25-201ENST00000441039 533 ntBASIC3.26□□□□□ -1.89
CCDC89Q8N998 AC118469.1-201ENST00000442943 488 ntBASIC3.26□□□□□ -1.89
CCDC89Q8N998 SSXP5-201ENST00000443473 287 ntBASIC3.26□□□□□ -1.89
CCDC89Q8N998 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC89Q8N998 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC89Q8N998 RNU6-953P-201ENST00000459154 107 ntBASIC3.26□□□□□ -1.89
CCDC89Q8N998 RPL21P10-201ENST00000463521 490 ntBASIC3.26□□□□□ -1.89
CCDC89Q8N998 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC89Q8N998 RNU5F-8P-201ENST00000515941 111 ntBASIC3.26□□□□□ -1.89
CCDC89Q8N998 SCARNA17.1-201ENST00000516211 143 ntBASIC3.26□□□□□ -1.89
CCDC89Q8N998 SCARNA17.2-201ENST00000516334 143 ntBASIC3.26□□□□□ -1.89
CCDC89Q8N998 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
CCDC89Q8N998 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC89Q8N998 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CCDC89Q8N998 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC89Q8N998 AC007458.1-201ENST00000542812 373 ntBASIC3.26□□□□□ -1.89
CCDC89Q8N998 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC89Q8N998 MIR2682-201ENST00000580305 110 ntBASIC3.26□□□□□ -1.89
CCDC89Q8N998 AC090616.3-201ENST00000582184 217 ntBASIC3.26□□□□□ -1.89
CCDC89Q8N998 MIR3117-201ENST00000584034 78 ntBASIC3.26□□□□□ -1.89
CCDC89Q8N998 MIR4506-201ENST00000584693 77 ntBASIC3.26□□□□□ -1.89
CCDC89Q8N998 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms