Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL355810.1-201ENST00000614629 552 ntBASIC3.58□□□□□ -1.84
RAE1P78406 AL713922.2-201ENST00000619384 716 ntBASIC3.58□□□□□ -1.84
RAE1P78406 AC104985.2-201ENST00000620598 500 ntBASIC3.58□□□□□ -1.84
RAE1P78406 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.58□□□□□ -1.84
RAE1P78406 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
RAE1P78406 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RAE1P78406 TPTE2P4-201ENST00000258589 1605 ntBASIC3.58□□□□□ -1.84
RAE1P78406 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RAE1P78406 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
RAE1P78406 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
RAE1P78406 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RAE1P78406 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RAE1P78406 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
RAE1P78406 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RAE1P78406 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RAE1P78406 RNU6-1287P-201ENST00000362914 107 ntBASIC3.57□□□□□ -1.84
RAE1P78406 SNORA70.2-201ENST00000364506 135 ntBASIC3.57□□□□□ -1.84
RAE1P78406 RNA5SP167-201ENST00000365461 116 ntBASIC3.57□□□□□ -1.84
RAE1P78406 RNU6-1060P-201ENST00000384664 107 ntBASIC3.57□□□□□ -1.84
RAE1P78406 RNU6-1009P-201ENST00000390996 107 ntBASIC3.57□□□□□ -1.84
RAE1P78406 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RAE1P78406 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.57□□□□□ -1.84
RAE1P78406 AL513331.1-201ENST00000411908 397 ntBASIC3.57□□□□□ -1.84
RAE1P78406 RPL7P46-201ENST00000425129 740 ntBASIC3.57□□□□□ -1.84
RAE1P78406 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.57□□□□□ -1.84
RAE1P78406 ERLEC1P1-201ENST00000433806 578 ntBASIC3.57□□□□□ -1.84
RAE1P78406 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.57□□□□□ -1.84
RAE1P78406 TPT1P12-201ENST00000448968 492 ntBASIC3.57□□□□□ -1.84
RAE1P78406 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.57□□□□□ -1.84
RAE1P78406 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.57□□□□□ -1.84
RAE1P78406 FGF7P3-201ENST00000454645 303 ntBASIC3.57□□□□□ -1.84
RAE1P78406 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.57□□□□□ -1.84
RAE1P78406 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.57□□□□□ -1.84
RAE1P78406 RPL31P13-201ENST00000484151 370 ntBASIC3.57□□□□□ -1.84
RAE1P78406 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RAE1P78406 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.57□□□□□ -1.84
RAE1P78406 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.57□□□□□ -1.84
RAE1P78406 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
RAE1P78406 AC005921.1-201ENST00000510589 286 ntBASIC3.57□□□□□ -1.84
RAE1P78406 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.57□□□□□ -1.84
RAE1P78406 LRRC34P2-201ENST00000514850 553 ntBASIC3.57□□□□□ -1.84
RAE1P78406 RNU6-677P-201ENST00000516914 101 ntBASIC3.57□□□□□ -1.84
RAE1P78406 RN7SKP60-201ENST00000516985 239 ntBASIC3.57□□□□□ -1.84
RAE1P78406 IGKV2D-23-201ENST00000518179 286 ntBASIC3.57□□□□□ -1.84
RAE1P78406 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.57□□□□□ -1.84
RAE1P78406 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.57□□□□□ -1.84
RAE1P78406 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.57□□□□□ -1.84
RAE1P78406 AC078814.3-201ENST00000553036 491 ntBASIC3.57□□□□□ -1.84
RAE1P78406 AC006504.1-201ENST00000562493 3666 ntBASIC3.57□□□□□ -1.84
RAE1P78406 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.57□□□□□ -1.84
RAE1P78406 MIR3921-201ENST00000577308 85 ntBASIC3.57□□□□□ -1.84
RAE1P78406 RN7SL703P-201ENST00000578485 302 ntBASIC3.57□□□□□ -1.84
RAE1P78406 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.57□□□□□ -1.84
RAE1P78406 AC011712.1-201ENST00000588959 234 ntBASIC3.57□□□□□ -1.84
RAE1P78406 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.57□□□□□ -1.84
RAE1P78406 DPPA3P3-201ENST00000603842 430 ntBASIC3.57□□□□□ -1.84
RAE1P78406 AC104763.2-201ENST00000604179 382 ntBASIC3.57□□□□□ -1.84
RAE1P78406 AP001330.4-201ENST00000604350 154 ntBASIC3.57□□□□□ -1.84
RAE1P78406 MIR6875-201ENST00000617506 72 ntBASIC3.57□□□□□ -1.84
RAE1P78406 ZYXP1-201ENST00000617638 118 ntBASIC3.57□□□□□ -1.84
RAE1P78406 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.57□□□□□ -1.84
RAE1P78406 AC100810.6-201ENST00000638068 285 ntBASIC3.57□□□□□ -1.84
RAE1P78406 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
RAE1P78406 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
RAE1P78406 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RAE1P78406 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RAE1P78406 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.56□□□□□ -1.84
RAE1P78406 AC116096.1-201ENST00000566804 2314 ntBASIC3.56□□□□□ -1.84
RAE1P78406 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.56□□□□□ -1.84
RAE1P78406 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RAE1P78406 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
RAE1P78406 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RAE1P78406 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RAE1P78406 MTND4P14-201ENST00000435799 1354 ntBASIC3.56□□□□□ -1.84
RAE1P78406 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.56□□□□□ -1.84
RAE1P78406 RNA5SP189-201ENST00000364920 115 ntBASIC3.56□□□□□ -1.84
RAE1P78406 RNU6-38P-201ENST00000384085 107 ntBASIC3.56□□□□□ -1.84
RAE1P78406 RNU6-14P-201ENST00000384630 106 ntBASIC3.56□□□□□ -1.84
RAE1P78406 MIR514A1-201ENST00000385133 98 ntBASIC3.56□□□□□ -1.84
RAE1P78406 RNA5SP424-201ENST00000390988 115 ntBASIC3.56□□□□□ -1.84
RAE1P78406 RNU6-550P-201ENST00000391057 101 ntBASIC3.56□□□□□ -1.84
RAE1P78406 PPIAP31-201ENST00000405422 495 ntBASIC3.56□□□□□ -1.84
RAE1P78406 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.56□□□□□ -1.84
RAE1P78406 SNORA3.3-201ENST00000408712 125 ntBASIC3.56□□□□□ -1.84
RAE1P78406 RN7SKP140-201ENST00000411196 284 ntBASIC3.56□□□□□ -1.84
RAE1P78406 AC009161.1-201ENST00000417306 376 ntBASIC3.56□□□□□ -1.84
RAE1P78406 AC068533.1-201ENST00000418542 415 ntBASIC3.56□□□□□ -1.84
RAE1P78406 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RAE1P78406 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RAE1P78406 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.56□□□□□ -1.84
RAE1P78406 RNU6-333P-201ENST00000459117 107 ntBASIC3.56□□□□□ -1.84
RAE1P78406 RPL21P8-201ENST00000465083 535 ntBASIC3.56□□□□□ -1.84
RAE1P78406 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.56□□□□□ -1.84
RAE1P78406 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.56□□□□□ -1.84
RAE1P78406 RNA5SP164-201ENST00000516533 110 ntBASIC3.56□□□□□ -1.84
RAE1P78406 AL137161.1-201ENST00000532231 390 ntBASIC3.56□□□□□ -1.84
RAE1P78406 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.56□□□□□ -1.84
RAE1P78406 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.56□□□□□ -1.84
RAE1P78406 AL121576.1-201ENST00000556055 276 ntBASIC3.56□□□□□ -1.84
RAE1P78406 AC136624.4-201ENST00000573044 370 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms