Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
EIF4A1P60842 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
EIF4A1P60842 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
EIF4A1P60842 Y_RNA.1-201ENST00000352915 104 ntBASIC4.02□□□□□ -1.77
EIF4A1P60842 RNU6-181P-201ENST00000363225 107 ntBASIC4.02□□□□□ -1.77
EIF4A1P60842 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.02□□□□□ -1.77
EIF4A1P60842 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
EIF4A1P60842 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
EIF4A1P60842 AL590002.1-201ENST00000406554 418 ntBASIC4.02□□□□□ -1.77
EIF4A1P60842 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.02□□□□□ -1.77
EIF4A1P60842 EI24P1-201ENST00000416584 867 ntBASIC4.02□□□□□ -1.77
EIF4A1P60842 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.02□□□□□ -1.77
EIF4A1P60842 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.02□□□□□ -1.77
EIF4A1P60842 AC002486.1-201ENST00000435098 391 ntBASIC4.02□□□□□ -1.77
EIF4A1P60842 TIMM9P1-201ENST00000436122 256 ntBASIC4.02□□□□□ -1.77
EIF4A1P60842 AC016696.1-201ENST00000446949 318 ntBASIC4.02□□□□□ -1.77
EIF4A1P60842 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.02□□□□□ -1.77
EIF4A1P60842 MTND1P9-201ENST00000453775 944 ntBASIC4.02□□□□□ -1.77
EIF4A1P60842 HMGN2P7-201ENST00000456186 273 ntBASIC4.02□□□□□ -1.77
EIF4A1P60842 CEACAMP4-201ENST00000457676 421 ntBASIC4.02□□□□□ -1.77
EIF4A1P60842 AC010401.1-201ENST00000463867 348 ntBASIC4.02□□□□□ -1.77
EIF4A1P60842 RPL9P32-201ENST00000464118 620 ntBASIC4.02□□□□□ -1.77
EIF4A1P60842 AC007182.2-201ENST00000489251 402 ntBASIC4.02□□□□□ -1.77
EIF4A1P60842 AP001086.1-201ENST00000494882 321 ntBASIC4.02□□□□□ -1.77
EIF4A1P60842 AC019235.1-201ENST00000503847 207 ntBASIC4.02□□□□□ -1.77
EIF4A1P60842 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.02□□□□□ -1.77
EIF4A1P60842 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.02□□□□□ -1.77
EIF4A1P60842 RNU6-445P-201ENST00000516949 107 ntBASIC4.02□□□□□ -1.77
EIF4A1P60842 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
EIF4A1P60842 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.02□□□□□ -1.77
EIF4A1P60842 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.02□□□□□ -1.77
EIF4A1P60842 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.02□□□□□ -1.77
EIF4A1P60842 SNRPGP15-201ENST00000600149 222 ntBASIC4.02□□□□□ -1.77
EIF4A1P60842 AL137843.1-201ENST00000605078 385 ntBASIC4.02□□□□□ -1.77
EIF4A1P60842 AL033523.1-201ENST00000605153 153 ntBASIC4.02□□□□□ -1.77
EIF4A1P60842 AL590282.1-201ENST00000610379 1136 ntBASIC4.02□□□□□ -1.77
EIF4A1P60842 AL356585.4-201ENST00000623078 1229 ntBASIC4.02□□□□□ -1.77
EIF4A1P60842 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.02□□□□□ -1.77
EIF4A1P60842 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.02□□□□□ -1.77
EIF4A1P60842 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
EIF4A1P60842 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.02□□□□□ -1.77
EIF4A1P60842 AL138713.1-201ENST00000624026 2130 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
EIF4A1P60842 AC007496.3-201ENST00000624987 3443 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
EIF4A1P60842 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
EIF4A1P60842 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
EIF4A1P60842 RNU5A-8P-201ENST00000364102 114 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 RNU6-1078P-201ENST00000364522 103 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 SNORA20.2-201ENST00000383922 131 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
EIF4A1P60842 RNU6-780P-201ENST00000391030 104 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 AL122016.1-201ENST00000403365 367 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 CIR1P3-201ENST00000405137 479 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 MTND4LP11-201ENST00000422184 280 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 RPL35AP12-201ENST00000425362 338 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 DPPA2P1-201ENST00000428060 556 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 TIMM9P3-201ENST00000428659 274 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.01□□□□□ -1.77
EIF4A1P60842 MTAPP1-201ENST00000489154 819 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 AC078918.1-201ENST00000498515 228 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.01□□□□□ -1.77
EIF4A1P60842 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.01□□□□□ -1.77
EIF4A1P60842 ARL4AP2-201ENST00000507378 601 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 AC009646.1-201ENST00000510455 318 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 AC021146.1-201ENST00000511202 716 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 SCARNA13-201ENST00000516672 275 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 RNU6-798P-201ENST00000516912 103 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 RNA5SP337-201ENST00000517007 109 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.01□□□□□ -1.77
EIF4A1P60842 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.01□□□□□ -1.77
EIF4A1P60842 OR4T1P-201ENST00000554933 911 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.01□□□□□ -1.77
EIF4A1P60842 COX6CP3-201ENST00000580869 223 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.01□□□□□ -1.77
EIF4A1P60842 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.01□□□□□ -1.77
EIF4A1P60842 KC877982.1-201ENST00000602313 470 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 AL391646.1-201ENST00000603860 190 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 AL031176.1-201ENST00000604554 466 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 AC103710.3-201ENST00000608157 948 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 AC007014.2-201ENST00000615581 479 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 AC091903.1-201ENST00000624322 454 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.01□□□□□ -1.77
EIF4A1P60842 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
EIF4A1P60842 AL157700.1-201ENST00000561973 1432 ntBASIC4.01□□□□□ -1.77
EIF4A1P60842 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
EIF4A1P60842 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
EIF4A1P60842 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
EIF4A1P60842 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.01□□□□□ -1.77
EIF4A1P60842 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
EIF4A1P60842 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
EIF4A1P60842 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4□□□□□ -1.77
EIF4A1P60842 Y_RNA.9-201ENST00000362354 101 ntBASIC4□□□□□ -1.77
EIF4A1P60842 RNU6-1249P-201ENST00000363237 111 ntBASIC4□□□□□ -1.77
EIF4A1P60842 RNU6-335P-201ENST00000364563 113 ntBASIC4□□□□□ -1.77
EIF4A1P60842 CRP-202ENST00000368110 667 ntTSL 3 BASIC4□□□□□ -1.77
EIF4A1P60842 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
EIF4A1P60842 SNORD15B-201ENST00000384714 146 ntBASIC4□□□□□ -1.77
EIF4A1P60842 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4□□□□□ -1.77
EIF4A1P60842 SNORD67-201ENST00000390833 111 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms