Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 MTATP6P4-201ENST00000427725 675 ntBASIC4.35□□□□□ -1.71
COL6A2P12110 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.35□□□□□ -1.71
COL6A2P12110 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.35□□□□□ -1.71
COL6A2P12110 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.35□□□□□ -1.71
COL6A2P12110 Y_RNA.653-201ENST00000459091 95 ntBASIC4.35□□□□□ -1.71
COL6A2P12110 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.35□□□□□ -1.71
COL6A2P12110 MTCYBP40-201ENST00000509390 1135 ntBASIC4.35□□□□□ -1.71
COL6A2P12110 OR7H2P-201ENST00000513483 306 ntBASIC4.35□□□□□ -1.71
COL6A2P12110 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.35□□□□□ -1.71
COL6A2P12110 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.35□□□□□ -1.71
COL6A2P12110 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.35□□□□□ -1.71
COL6A2P12110 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.35□□□□□ -1.71
COL6A2P12110 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.35□□□□□ -1.71
COL6A2P12110 ATP1B3P1-201ENST00000605365 821 ntBASIC4.35□□□□□ -1.71
COL6A2P12110 MIR432-201ENST00000606207 94 ntBASIC4.35□□□□□ -1.71
COL6A2P12110 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.35□□□□□ -1.71
COL6A2P12110 MIR6810-201ENST00000622701 70 ntBASIC4.35□□□□□ -1.71
COL6A2P12110 uc_338.22-201ENST00000622722 187 ntBASIC4.35□□□□□ -1.71
COL6A2P12110 AC022418.1-201ENST00000624118 445 ntBASIC4.35□□□□□ -1.71
COL6A2P12110 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
COL6A2P12110 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL6A2P12110 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL6A2P12110 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
COL6A2P12110 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL6A2P12110 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
COL6A2P12110 MTND5P10-201ENST00000603719 1809 ntBASIC4.35□□□□□ -1.71
COL6A2P12110 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL6A2P12110 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.35□□□□□ -1.71
COL6A2P12110 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL6A2P12110 AL365440.1-201ENST00000436135 2167 ntBASIC4.34□□□□□ -1.71
COL6A2P12110 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.34□□□□□ -1.71
COL6A2P12110 RNU6-562P-201ENST00000362731 107 ntBASIC4.34□□□□□ -1.71
COL6A2P12110 Y_RNA.145-201ENST00000363527 102 ntBASIC4.34□□□□□ -1.71
COL6A2P12110 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL6A2P12110 SNORA36C-201ENST00000384289 132 ntBASIC4.34□□□□□ -1.71
COL6A2P12110 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
COL6A2P12110 AL590704.1-201ENST00000402856 794 ntBASIC4.34□□□□□ -1.71
COL6A2P12110 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL6A2P12110 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
COL6A2P12110 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.34□□□□□ -1.71
COL6A2P12110 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.34□□□□□ -1.71
COL6A2P12110 RPS20P14-201ENST00000412545 360 ntBASIC4.34□□□□□ -1.71
COL6A2P12110 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.34□□□□□ -1.71
COL6A2P12110 AC080125.1-201ENST00000414888 684 ntBASIC4.34□□□□□ -1.71
COL6A2P12110 AC092809.3-201ENST00000415453 231 ntBASIC4.34□□□□□ -1.71
COL6A2P12110 AC245054.2-201ENST00000415639 319 ntBASIC4.34□□□□□ -1.71
COL6A2P12110 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.34□□□□□ -1.71
COL6A2P12110 AL160275.3-201ENST00000423876 471 ntBASIC4.34□□□□□ -1.71
COL6A2P12110 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.34□□□□□ -1.71
COL6A2P12110 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.34□□□□□ -1.71
COL6A2P12110 RPL26P6-201ENST00000440913 438 ntBASIC4.34□□□□□ -1.71
COL6A2P12110 AL137792.2-201ENST00000443484 235 ntBASIC4.34□□□□□ -1.71
COL6A2P12110 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.34□□□□□ -1.71
COL6A2P12110 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.34□□□□□ -1.71
COL6A2P12110 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.34□□□□□ -1.71
COL6A2P12110 RPS29P22-201ENST00000472363 168 ntBASIC4.34□□□□□ -1.71
COL6A2P12110 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL6A2P12110 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.34□□□□□ -1.71
COL6A2P12110 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.34□□□□□ -1.71
COL6A2P12110 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.34□□□□□ -1.71
COL6A2P12110 AL352979.3-201ENST00000553515 247 ntBASIC4.34□□□□□ -1.71
COL6A2P12110 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.34□□□□□ -1.71
COL6A2P12110 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.34□□□□□ -1.71
COL6A2P12110 RN7SL690P-201ENST00000582087 240 ntBASIC4.34□□□□□ -1.71
COL6A2P12110 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.34□□□□□ -1.71
COL6A2P12110 AC040896.1-201ENST00000613819 479 ntBASIC4.34□□□□□ -1.71
COL6A2P12110 AL157817.1-201ENST00000614264 790 ntBASIC4.34□□□□□ -1.71
COL6A2P12110 AC015967.1-201ENST00000619893 476 ntBASIC4.34□□□□□ -1.71
COL6A2P12110 AC244517.12-201ENST00000623581 663 ntBASIC4.34□□□□□ -1.71
COL6A2P12110 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL6A2P12110 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.34□□□□□ -1.71
COL6A2P12110 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.34□□□□□ -1.71
COL6A2P12110 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
COL6A2P12110 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
COL6A2P12110 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
COL6A2P12110 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
COL6A2P12110 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
COL6A2P12110 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL6A2P12110 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL6A2P12110 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL6A2P12110 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL6A2P12110 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
COL6A2P12110 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL6A2P12110 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL6A2P12110 Y_RNA.112-201ENST00000363250 102 ntBASIC4.33□□□□□ -1.72
COL6A2P12110 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.33□□□□□ -1.72
COL6A2P12110 MIR659-201ENST00000384963 97 ntBASIC4.33□□□□□ -1.72
COL6A2P12110 AL391417.1-201ENST00000404100 426 ntBASIC4.33□□□□□ -1.72
COL6A2P12110 MTCO1P39-201ENST00000426148 480 ntBASIC4.33□□□□□ -1.72
COL6A2P12110 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.33□□□□□ -1.72
COL6A2P12110 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.33□□□□□ -1.72
COL6A2P12110 RPL37P6-201ENST00000460682 294 ntBASIC4.33□□□□□ -1.72
COL6A2P12110 AC092324.1-201ENST00000468671 324 ntBASIC4.33□□□□□ -1.72
COL6A2P12110 AC006463.2-201ENST00000473326 348 ntBASIC4.33□□□□□ -1.72
COL6A2P12110 AC106872.2-201ENST00000494303 480 ntBASIC4.33□□□□□ -1.72
COL6A2P12110 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.33□□□□□ -1.72
COL6A2P12110 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.33□□□□□ -1.72
COL6A2P12110 ERHP1-201ENST00000523006 310 ntBASIC4.33□□□□□ -1.72
COL6A2P12110 AC069061.3-201ENST00000582254 823 ntBASIC4.33□□□□□ -1.72
COL6A2P12110 SNORD84-203ENST00000584275 78 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms