Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 USP9YP13-201ENST00000417797 480 ntBASIC3.13□□□□□ -1.91
COL2A1P02458 RPL7P12-201ENST00000446719 750 ntBASIC3.13□□□□□ -1.91
COL2A1P02458 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.13□□□□□ -1.91
COL2A1P02458 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.13□□□□□ -1.91
COL2A1P02458 AC114786.4-201ENST00000508771 728 ntBASIC3.13□□□□□ -1.91
COL2A1P02458 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.13□□□□□ -1.91
COL2A1P02458 AP003122.3-201ENST00000526316 255 ntBASIC3.13□□□□□ -1.91
COL2A1P02458 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.13□□□□□ -1.91
COL2A1P02458 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.13□□□□□ -1.91
COL2A1P02458 AL355836.1-201ENST00000555951 870 ntBASIC3.13□□□□□ -1.91
COL2A1P02458 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.13□□□□□ -1.91
COL2A1P02458 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.13□□□□□ -1.91
COL2A1P02458 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.13□□□□□ -1.91
COL2A1P02458 AC044792.1-201ENST00000593294 196 ntBASIC3.13□□□□□ -1.91
COL2A1P02458 AC005034.5-201ENST00000604219 466 ntBASIC3.13□□□□□ -1.91
COL2A1P02458 AL022154.1-201ENST00000604698 785 ntBASIC3.13□□□□□ -1.91
COL2A1P02458 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.13□□□□□ -1.91
COL2A1P02458 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.13□□□□□ -1.91
COL2A1P02458 GDI2P1-201ENST00000429312 1336 ntBASIC3.13□□□□□ -1.91
COL2A1P02458 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
COL2A1P02458 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
COL2A1P02458 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
COL2A1P02458 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.12□□□□□ -1.91
COL2A1P02458 AC093909.5-201ENST00000621839 1799 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL2A1P02458 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
COL2A1P02458 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL2A1P02458 HMGB1P5-201ENST00000255320 642 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 RNU6-1339P-201ENST00000363574 91 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 Y_RNA.160-201ENST00000363677 92 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 RNU5E-5P-201ENST00000365379 116 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 RNU6-116P-201ENST00000384042 109 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 MIR181A2-201ENST00000384863 110 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 MIR3074-201ENST00000384885 81 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 MIR592-201ENST00000384959 97 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
COL2A1P02458 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.12□□□□□ -1.91
COL2A1P02458 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.12□□□□□ -1.91
COL2A1P02458 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.12□□□□□ -1.91
COL2A1P02458 NUP35P2-201ENST00000416748 943 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 YPEL5P1-201ENST00000419731 367 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 AL009174.1-201ENST00000426577 416 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.12□□□□□ -1.91
COL2A1P02458 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL2A1P02458 MTND5P14-201ENST00000441481 1267 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.12□□□□□ -1.91
COL2A1P02458 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.12□□□□□ -1.91
COL2A1P02458 AL033528.1-201ENST00000453780 140 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 AC239798.3-201ENST00000454459 408 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 MTND1P11-201ENST00000456661 876 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 AC079382.1-201ENST00000493346 557 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 AC114981.1-201ENST00000503897 678 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 AC108120.2-201ENST00000512973 294 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 AC018797.3-201ENST00000513388 1241 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 MTND1P35-201ENST00000526739 508 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.12□□□□□ -1.91
COL2A1P02458 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.12□□□□□ -1.91
COL2A1P02458 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.12□□□□□ -1.91
COL2A1P02458 AC122134.1-201ENST00000565664 1104 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 MIR548Y-201ENST00000582739 110 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 MIR4635-201ENST00000583759 79 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 AC078899.3-201ENST00000599065 212 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 DUXAP4-201ENST00000603046 613 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 AL161729.4-201ENST00000604650 476 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 AC104458.1-201ENST00000608243 463 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 AC091304.9-201ENST00000612091 226 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 AC010133.1-201ENST00000615809 842 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 AL445264.1-201ENST00000621719 171 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 AC112487.2-201ENST00000637950 304 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.12□□□□□ -1.91
COL2A1P02458 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.12□□□□□ -1.91
COL2A1P02458 GTF2H2B-203ENST00000508065 1432 ntBASIC3.12□□□□□ -1.91
COL2A1P02458 ZNF72P-201ENST00000425869 1908 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 MTCO1P14-201ENST00000441695 1559 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 Y_RNA.9-201ENST00000362354 101 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 Y_RNA.295-201ENST00000364918 102 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 Y_RNA.296-201ENST00000364930 108 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL2A1P02458 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.11□□□□□ -1.91
COL2A1P02458 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.11□□□□□ -1.91
COL2A1P02458 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
COL2A1P02458 MIR217-201ENST00000384817 110 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 RPL23AP29-201ENST00000397284 453 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
COL2A1P02458 RPS15AP6-201ENST00000420703 385 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.11□□□□□ -1.91
COL2A1P02458 AC093084.1-201ENST00000424233 687 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 RWDD4P2-201ENST00000426392 563 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 AL591806.2-201ENST00000433122 173 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 RPL7P29-201ENST00000437151 728 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 HMGB3P12-201ENST00000438745 556 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.11□□□□□ -1.91
COL2A1P02458 BX322784.1-201ENST00000455793 1077 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 AC133134.1-201ENST00000466800 359 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 HMGN1P12-201ENST00000499125 195 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 RNF138P1-201ENST00000502765 546 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.11□□□□□ -1.91
COL2A1P02458 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.11□□□□□ -1.91
COL2A1P02458 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
COL2A1P02458 RNA5SP320-201ENST00000516263 124 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms