Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC004801.2-202ENST00000463559 283 ntBASIC4.76□□□□□ -1.65
SRGAP3O43295 RPS20P21-201ENST00000466859 343 ntBASIC4.76□□□□□ -1.65
SRGAP3O43295 TRBVA-201ENST00000498804 316 ntBASIC4.76□□□□□ -1.65
SRGAP3O43295 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC4.76□□□□□ -1.65
SRGAP3O43295 PTP4A1P4-201ENST00000512479 322 ntBASIC4.76□□□□□ -1.65
SRGAP3O43295 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.76□□□□□ -1.65
SRGAP3O43295 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.76□□□□□ -1.65
SRGAP3O43295 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.76□□□□□ -1.65
SRGAP3O43295 CYP2C61P-201ENST00000604072 290 ntBASIC4.76□□□□□ -1.65
SRGAP3O43295 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.76□□□□□ -1.65
SRGAP3O43295 uc_338.22-201ENST00000622722 187 ntBASIC4.76□□□□□ -1.65
SRGAP3O43295 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.76□□□□□ -1.65
SRGAP3O43295 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.76□□□□□ -1.65
SRGAP3O43295 AL138713.1-201ENST00000624026 2130 ntBASIC4.76□□□□□ -1.65
SRGAP3O43295 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.76□□□□□ -1.65
SRGAP3O43295 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
SRGAP3O43295 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.76□□□□□ -1.65
SRGAP3O43295 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
SRGAP3O43295 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SRGAP3O43295 RN7SKP224-201ENST00000364140 325 ntBASIC4.75□□□□□ -1.65
SRGAP3O43295 RN7SKP156-201ENST00000410308 342 ntBASIC4.75□□□□□ -1.65
SRGAP3O43295 RN7SKP158-201ENST00000410453 326 ntBASIC4.75□□□□□ -1.65
SRGAP3O43295 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.75□□□□□ -1.65
SRGAP3O43295 AL358176.2-201ENST00000425769 204 ntBASIC4.75□□□□□ -1.65
SRGAP3O43295 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.75□□□□□ -1.65
SRGAP3O43295 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.75□□□□□ -1.65
SRGAP3O43295 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.75□□□□□ -1.65
SRGAP3O43295 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.75□□□□□ -1.65
SRGAP3O43295 RPL30P15-201ENST00000457129 321 ntBASIC4.75□□□□□ -1.65
SRGAP3O43295 Y_RNA.654-201ENST00000497848 106 ntBASIC4.75□□□□□ -1.65
SRGAP3O43295 HMGB1P21-201ENST00000502313 581 ntBASIC4.75□□□□□ -1.65
SRGAP3O43295 FTH1P24-201ENST00000503502 462 ntBASIC4.75□□□□□ -1.65
SRGAP3O43295 RAC1P2-201ENST00000511164 579 ntBASIC4.75□□□□□ -1.65
SRGAP3O43295 SMURF2P1-201ENST00000514992 481 ntBASIC4.75□□□□□ -1.65
SRGAP3O43295 AC022634.1-201ENST00000520765 532 ntBASIC4.75□□□□□ -1.65
SRGAP3O43295 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.75□□□□□ -1.65
SRGAP3O43295 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.75□□□□□ -1.65
SRGAP3O43295 AP000857.1-201ENST00000532151 543 ntBASIC4.75□□□□□ -1.65
SRGAP3O43295 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.75□□□□□ -1.65
SRGAP3O43295 AC092470.1-201ENST00000546187 132 ntBASIC4.75□□□□□ -1.65
SRGAP3O43295 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.75□□□□□ -1.65
SRGAP3O43295 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.75□□□□□ -1.65
SRGAP3O43295 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.75□□□□□ -1.65
SRGAP3O43295 AC022893.3-201ENST00000607665 437 ntBASIC4.75□□□□□ -1.65
SRGAP3O43295 AC090425.1-201ENST00000610007 140 ntBASIC4.75□□□□□ -1.65
SRGAP3O43295 AC103858.2-201ENST00000621471 543 ntBASIC4.75□□□□□ -1.65
SRGAP3O43295 AL161637.1-201ENST00000622380 412 ntBASIC4.75□□□□□ -1.65
SRGAP3O43295 AL136313.1-201ENST00000624804 202 ntBASIC4.75□□□□□ -1.65
SRGAP3O43295 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.75□□□□□ -1.65
SRGAP3O43295 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SRGAP3O43295 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SRGAP3O43295 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SRGAP3O43295 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SRGAP3O43295 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.75□□□□□ -1.65
SRGAP3O43295 AL606537.1-201ENST00000607258 2011 ntBASIC4.75□□□□□ -1.65
SRGAP3O43295 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
SRGAP3O43295 AC018555.1-201ENST00000567548 1980 ntBASIC4.74□□□□□ -1.65
SRGAP3O43295 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SRGAP3O43295 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.74□□□□□ -1.65
SRGAP3O43295 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SRGAP3O43295 Y_RNA.28-201ENST00000362554 111 ntBASIC4.74□□□□□ -1.65
SRGAP3O43295 RNU6-511P-201ENST00000363496 107 ntBASIC4.74□□□□□ -1.65
SRGAP3O43295 MIR134-201ENST00000385258 73 ntBASIC4.74□□□□□ -1.65
SRGAP3O43295 AL136372.1-201ENST00000403060 228 ntBASIC4.74□□□□□ -1.65
SRGAP3O43295 AL592114.1-201ENST00000403842 483 ntBASIC4.74□□□□□ -1.65
SRGAP3O43295 RN7SKP159-201ENST00000410657 292 ntBASIC4.74□□□□□ -1.65
SRGAP3O43295 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.74□□□□□ -1.65
SRGAP3O43295 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.74□□□□□ -1.65
SRGAP3O43295 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.74□□□□□ -1.65
SRGAP3O43295 AC092013.1-201ENST00000438795 332 ntBASIC4.74□□□□□ -1.65
SRGAP3O43295 SNORA71B-202ENST00000439232 272 ntBASIC4.74□□□□□ -1.65
SRGAP3O43295 AC127537.2-201ENST00000439258 465 ntBASIC4.74□□□□□ -1.65
SRGAP3O43295 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.74□□□□□ -1.65
SRGAP3O43295 AL359073.1-201ENST00000448036 403 ntBASIC4.74□□□□□ -1.65
SRGAP3O43295 Y_RNA.653-201ENST00000459091 95 ntBASIC4.74□□□□□ -1.65
SRGAP3O43295 RNU7-59P-201ENST00000459101 61 ntBASIC4.74□□□□□ -1.65
SRGAP3O43295 AC084198.1-201ENST00000477747 402 ntBASIC4.74□□□□□ -1.65
SRGAP3O43295 CCDC34P1-201ENST00000507441 517 ntBASIC4.74□□□□□ -1.65
SRGAP3O43295 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.74□□□□□ -1.65
SRGAP3O43295 RPS27AP18-201ENST00000515536 459 ntBASIC4.74□□□□□ -1.65
SRGAP3O43295 RNA5SP208-201ENST00000516156 78 ntBASIC4.74□□□□□ -1.65
SRGAP3O43295 RNU6-566P-201ENST00000516790 107 ntBASIC4.74□□□□□ -1.65
SRGAP3O43295 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.74□□□□□ -1.65
SRGAP3O43295 DEFB109D-201ENST00000529497 240 ntBASIC4.74□□□□□ -1.65
SRGAP3O43295 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.74□□□□□ -1.65
SRGAP3O43295 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.74□□□□□ -1.65
SRGAP3O43295 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.74□□□□□ -1.65
SRGAP3O43295 AC006130.2-201ENST00000586202 326 ntBASIC4.74□□□□□ -1.65
SRGAP3O43295 AC005344.1-201ENST00000613391 459 ntBASIC4.74□□□□□ -1.65
SRGAP3O43295 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SRGAP3O43295 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.74□□□□□ -1.65
SRGAP3O43295 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SRGAP3O43295 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.73□□□□□ -1.65
SRGAP3O43295 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.73□□□□□ -1.65
SRGAP3O43295 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
SRGAP3O43295 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.73□□□□□ -1.65
SRGAP3O43295 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.73□□□□□ -1.65
SRGAP3O43295 SNORD113-7-201ENST00000363762 77 ntBASIC4.73□□□□□ -1.65
SRGAP3O43295 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.73□□□□□ -1.65
SRGAP3O43295 AL139396.1-201ENST00000421137 167 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms