Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 OR4G2P-202ENST00000641004 1759 ntBASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PCDHB11Q9Y5F2 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 RNU6-682P-201ENST00000363843 106 ntBASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 RNU6-290P-201ENST00000365212 101 ntBASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 RNU6-356P-201ENST00000384140 107 ntBASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 SNORA67-201ENST00000384423 137 ntBASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 SNORD78.2-201ENST00000391076 69 ntBASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 MTCO1P39-201ENST00000426148 480 ntBASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 TDGF1P1-201ENST00000445734 527 ntBASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 U8.22-201ENST00000459141 133 ntBASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 AC090602.1-201ENST00000469695 252 ntBASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 RN7SL222P-201ENST00000476452 299 ntBASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 RN7SL808P-201ENST00000496066 299 ntBASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 SEPT14P8-201ENST00000508026 178 ntBASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 RN7SKP66-201ENST00000516681 231 ntBASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 AF186190.1-201ENST00000517470 480 ntBASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 AC005476.1-201ENST00000554427 397 ntBASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 AC023575.1-201ENST00000580510 358 ntBASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 AC000068.2-201ENST00000608816 460 ntBASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PCDHB11Q9Y5F2 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 RNA5SP305-201ENST00000362665 119 ntBASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 RN7SKP95-201ENST00000362860 303 ntBASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 Y_RNA.76-201ENST00000362931 109 ntBASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 U8.4-201ENST00000363626 134 ntBASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 RNU6-102P-201ENST00000384485 104 ntBASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 RNU2-20P-201ENST00000410425 191 ntBASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 AC079809.1-201ENST00000415468 276 ntBASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 AC091390.3-201ENST00000426478 338 ntBASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 AC007389.2-201ENST00000434630 306 ntBASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 HMGB1P40-201ENST00000525121 540 ntBASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 AL049539.1-201ENST00000611964 459 ntBASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 AC097372.5-201ENST00000623665 376 ntBASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 AL022311.1-201ENST00000623726 19416 ntBASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB11Q9Y5F2 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 AC006484.1-201ENST00000435086 1884 ntBASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 RNA5SP335-201ENST00000363817 110 ntBASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 RNU6-937P-201ENST00000384325 106 ntBASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 MIR10A-201ENST00000385043 110 ntBASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 Y_RNA.625-201ENST00000411256 107 ntBASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 AC017079.2-201ENST00000416102 485 ntBASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 COX6CP10-201ENST00000416832 224 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms