Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC1.37□□□□□ -2.19
COMMD3Q9UBI1 AL353689.1-201ENST00000438895 199 ntBASIC1.37□□□□□ -2.19
COMMD3Q9UBI1 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.37□□□□□ -2.19
COMMD3Q9UBI1 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.37□□□□□ -2.19
COMMD3Q9UBI1 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.37□□□□□ -2.19
COMMD3Q9UBI1 AC017007.3-201ENST00000479865 435 ntBASIC1.37□□□□□ -2.19
COMMD3Q9UBI1 AC006390.1-201ENST00000508068 283 ntBASIC1.37□□□□□ -2.19
COMMD3Q9UBI1 AC114786.4-201ENST00000508771 728 ntBASIC1.37□□□□□ -2.19
COMMD3Q9UBI1 AC109471.1-201ENST00000511631 612 ntBASIC1.37□□□□□ -2.19
COMMD3Q9UBI1 AC114797.1-201ENST00000514003 728 ntBASIC1.37□□□□□ -2.19
COMMD3Q9UBI1 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.37□□□□□ -2.19
COMMD3Q9UBI1 RNU1-103P-201ENST00000516502 125 ntBASIC1.37□□□□□ -2.19
COMMD3Q9UBI1 AC118273.2-201ENST00000532092 465 ntBASIC1.37□□□□□ -2.19
COMMD3Q9UBI1 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.37□□□□□ -2.19
COMMD3Q9UBI1 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.37□□□□□ -2.19
COMMD3Q9UBI1 AC106734.1-201ENST00000568646 663 ntBASIC1.37□□□□□ -2.19
COMMD3Q9UBI1 AC015688.2-201ENST00000584523 262 ntBASIC1.37□□□□□ -2.19
COMMD3Q9UBI1 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.37□□□□□ -2.19
COMMD3Q9UBI1 RPAP2P1-201ENST00000603626 1168 ntBASIC1.37□□□□□ -2.19
COMMD3Q9UBI1 AL592148.2-201ENST00000612210 372 ntBASIC1.37□□□□□ -2.19
COMMD3Q9UBI1 AC090772.4-201ENST00000623599 362 ntBASIC1.37□□□□□ -2.19
COMMD3Q9UBI1 AC068057.2-201ENST00000624047 895 ntBASIC1.37□□□□□ -2.19
COMMD3Q9UBI1 AC098679.5-201ENST00000624394 571 ntBASIC1.37□□□□□ -2.19
COMMD3Q9UBI1 SCARNA15.3-201ENST00000626315 122 ntBASIC1.37□□□□□ -2.19
COMMD3Q9UBI1 SCARNA4.1-201ENST00000628597 123 ntBASIC1.37□□□□□ -2.19
COMMD3Q9UBI1 AP000648.3-201ENST00000623539 4507 ntBASIC1.37□□□□□ -2.19
COMMD3Q9UBI1 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
COMMD3Q9UBI1 UBE2L2-201ENST00000254302 429 ntBASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 RNU4-82P-201ENST00000362443 140 ntBASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 RNU6-1339P-201ENST00000363574 91 ntBASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 RNU1-42P-201ENST00000364033 160 ntBASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 RNA5SP125-201ENST00000364843 120 ntBASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 MIR147B-201ENST00000390185 80 ntBASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 SNRPEP2-201ENST00000397592 279 ntBASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 AL133384.1-201ENST00000412744 351 ntBASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 Z98742.3-201ENST00000418637 326 ntBASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 HMGB1P49-201ENST00000418882 569 ntBASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 AC233981.1-201ENST00000423224 461 ntBASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 AL353729.1-201ENST00000425044 720 ntBASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 AL590383.1-201ENST00000428602 75 ntBASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 snoU109.1-201ENST00000459339 135 ntBASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 FO393415.2-201ENST00000480085 343 ntBASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 EEF1A1P37-201ENST00000522748 715 ntBASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 OR5AK1P-201ENST00000524837 922 ntBASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 AC004217.3-201ENST00000551552 878 ntBASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 AL391261.3-201ENST00000557194 520 ntBASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 AC027104.1-201ENST00000563702 681 ntBASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 MIR4299-201ENST00000577899 72 ntBASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 MIR4672-201ENST00000583126 81 ntBASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 AC013553.2-201ENST00000604244 589 ntBASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 AC021851.1-201ENST00000608537 1082 ntBASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 MIR7157-201ENST00000635801 60 ntBASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 ZNF876P-202ENST00000398732 1485 ntBASIC1.36□□□□□ -2.19
COMMD3Q9UBI1 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 RNU1-62P-201ENST00000362599 164 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 RNU6-819P-201ENST00000364116 107 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 RNU6-1083P-201ENST00000384022 107 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 MIR7-1-201ENST00000384871 110 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 MIR325-201ENST00000385260 98 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 AC068050.1-201ENST00000394891 380 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 UBE2V1P2-201ENST00000397758 440 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 MIR1304-201ENST00000408243 91 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 RNU6-955P-201ENST00000410497 104 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 RN7SKP51-201ENST00000410781 304 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 ZNF92P1Y-201ENST00000415010 1191 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 AC003685.2-201ENST00000422795 395 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 NDUFB4P7-201ENST00000423198 363 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 AL009174.1-201ENST00000426577 416 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 RPL21P134-201ENST00000453468 483 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 AC107032.1-201ENST00000485945 480 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 Y_RNA.675-201ENST00000516389 149 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 MIR892C-201ENST00000516410 77 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 HMGB1P1-201ENST00000522557 636 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 CBX3P7-201ENST00000532876 502 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 AL512310.1-201ENST00000548639 172 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 AL133241.1-201ENST00000556832 487 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 MIR3199-1-201ENST00000582434 88 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 MIR4435-1-201ENST00000582552 80 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 AC003001.2-201ENST00000616294 831 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 AC084768.2-201ENST00000622736 221 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 AL356585.4-201ENST00000623078 1229 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 AC025048.6-202ENST00000627667 438 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms