Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 RN7SKP185-201ENST00000362813 326 ntBASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 RNA5SP234-201ENST00000363916 119 ntBASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 RNU6-215P-201ENST00000365169 102 ntBASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 SNORA16A-201ENST00000384342 137 ntBASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 Y_RNA.497-201ENST00000384447 98 ntBASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 MIR551A-201ENST00000385042 96 ntBASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 Y_RNA.580-201ENST00000391004 95 ntBASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 HSPE1P8-201ENST00000406997 288 ntBASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 RN7SKP213-201ENST00000410746 298 ntBASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 AC093655.2-201ENST00000425735 631 ntBASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 AL139148.1-201ENST00000427122 680 ntBASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 AC092573.2-201ENST00000434546 243 ntBASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 CYCSP43-201ENST00000438233 310 ntBASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 AC022133.1-201ENST00000490961 571 ntBASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 SNORD116-28-201ENST00000516123 91 ntBASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 Mico1.1-201ENST00000611698 204 ntBASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CUEDC1Q9NWM3 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.3□□□□□ -1.56
CUEDC1Q9NWM3 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
CUEDC1Q9NWM3 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CUEDC1Q9NWM3 AC006206.1-201ENST00000544842 3387 ntBASIC5.3□□□□□ -1.56
CUEDC1Q9NWM3 AC007938.2-201ENST00000604666 2634 ntBASIC5.3□□□□□ -1.56
CUEDC1Q9NWM3 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CUEDC1Q9NWM3 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.3□□□□□ -1.56
CUEDC1Q9NWM3 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CUEDC1Q9NWM3 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CUEDC1Q9NWM3 RNU6-326P-201ENST00000365480 107 ntBASIC5.3□□□□□ -1.56
CUEDC1Q9NWM3 Y_RNA.504-201ENST00000384481 104 ntBASIC5.3□□□□□ -1.56
CUEDC1Q9NWM3 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.3□□□□□ -1.56
CUEDC1Q9NWM3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.3□□□□□ -1.56
CUEDC1Q9NWM3 AC005532.2-201ENST00000467154 373 ntBASIC5.3□□□□□ -1.56
CUEDC1Q9NWM3 Vault.1-201ENST00000516474 102 ntBASIC5.3□□□□□ -1.56
CUEDC1Q9NWM3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.3□□□□□ -1.56
CUEDC1Q9NWM3 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.3□□□□□ -1.56
CUEDC1Q9NWM3 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.3□□□□□ -1.56
CUEDC1Q9NWM3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.3□□□□□ -1.56
CUEDC1Q9NWM3 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CUEDC1Q9NWM3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.3□□□□□ -1.56
CUEDC1Q9NWM3 AC091895.1-201ENST00000624494 256 ntBASIC5.3□□□□□ -1.56
CUEDC1Q9NWM3 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
CUEDC1Q9NWM3 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CUEDC1Q9NWM3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CUEDC1Q9NWM3 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CUEDC1Q9NWM3 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.3□□□□□ -1.56
CUEDC1Q9NWM3 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 GVINP1-202ENST00000531871 7271 ntBASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 Y_RNA.273-201ENST00000364703 102 ntBASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 SNORD63-201ENST00000384262 68 ntBASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 AC009804.1-201ENST00000400949 179 ntBASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 MIR190B-201ENST00000401119 79 ntBASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 AL079342.1-201ENST00000401460 267 ntBASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 RNU2-43P-201ENST00000410306 190 ntBASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 RPL26P6-201ENST00000440913 438 ntBASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 CEACAMP7-201ENST00000444105 496 ntBASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 NDUFS5P3-201ENST00000450668 321 ntBASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 AP001324.2-201ENST00000461163 319 ntBASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 MLLT10P2-201ENST00000506434 249 ntBASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 GLUD1P3-202ENST00000508551 200 ntBASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 MTND3P25-201ENST00000509243 135 ntBASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 RN7SKP66-201ENST00000516681 231 ntBASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 AC025755.1-201ENST00000521306 278 ntBASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 AL590705.4-201ENST00000532209 134 ntBASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 AC009962.1-201ENST00000567327 3813 ntBASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 FAM60BP-201ENST00000578364 658 ntBASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 MIR4282-201ENST00000583613 67 ntBASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 AP000769.2-201ENST00000602344 396 ntBASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 AL365222.1-201ENST00000614661 98 ntBASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 SNORD39.4-201ENST00000620099 78 ntBASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms