Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 PCNPP5-201ENST00000452246 481 ntBASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 RN7SL738P-201ENST00000470264 297 ntBASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 RPS29P22-201ENST00000472363 168 ntBASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 AC092451.1-201ENST00000480211 153 ntBASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 RPL36AP41-201ENST00000493820 306 ntBASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 RN7SL690P-201ENST00000582087 240 ntBASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 HMGB2P1-201ENST00000591146 634 ntBASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 AC008745.1-201ENST00000604064 271 ntBASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 AC004696.1-201ENST00000614345 607 ntBASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 HSPA8P4-201ENST00000511877 1920 ntBASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 DDX10P1-201ENST00000448545 1933 ntBASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 AC009229.4-201ENST00000623854 1947 ntBASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 SNORD62.1-201ENST00000362541 86 ntBASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 Y_RNA.307-201ENST00000365022 117 ntBASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 MIR192-201ENST00000384915 110 ntBASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 RNA5SP332-201ENST00000391063 115 ntBASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 RPS16P5-201ENST00000406501 404 ntBASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 RNU6-847P-201ENST00000411115 108 ntBASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 USMG5P1-201ENST00000425964 177 ntBASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 PSMA2P3-201ENST00000429685 675 ntBASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 AC002553.2-201ENST00000453217 340 ntBASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 ISCUP1-201ENST00000454451 448 ntBASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 RN7SL41P-201ENST00000476144 297 ntBASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 AC026801.2-201ENST00000515352 425 ntBASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 AC209154.1-201ENST00000582156 337 ntBASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 AC011494.1-201ENST00000596454 237 ntBASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 AL034351.1-201ENST00000605288 668 ntBASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 AC007619.2-201ENST00000605743 379 ntBASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 AC100812.1-201ENST00000607622 580 ntBASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 HMGB1P24-202ENST00000615653 685 ntBASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 RN7SL722P-201ENST00000617780 284 ntBASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 RN7SL565P-201ENST00000618246 284 ntBASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 AC007998.5-201ENST00000622938 237 ntBASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 AC243312.2-201ENST00000623340 601 ntBASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 AC068254.2-201ENST00000623938 3577 ntBASIC4.06□□□□□ -1.76
SEC61A2Q9H9S3 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 AC138393.1-203ENST00000327086 343 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 RNU6-190P-201ENST00000384154 102 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 RNU6-821P-201ENST00000390995 107 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 GLULP6-201ENST00000399502 913 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 RNU6-101P-201ENST00000410323 104 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 RNU4-78P-201ENST00000410940 126 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 RN7SKP216-201ENST00000411050 312 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 AC119751.6-201ENST00000416712 186 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 AC243428.1-201ENST00000421099 264 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 MRPS18CP6-201ENST00000423587 223 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 NEFMP1-201ENST00000443423 1006 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 snoU109.4-201ENST00000458953 143 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 SCARNA10-201ENST00000459255 330 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 RPL37P6-202ENST00000464216 403 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 AC012158.1-204ENST00000483430 465 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 AC104564.1-201ENST00000493028 407 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 AC108022.1-201ENST00000493466 478 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 AC026801.1-201ENST00000497178 464 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms