Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 RNU6-861P-201ENST00000516745 106 ntBASIC5.44□□□□□ -1.54
NUCKS1Q9H1E3 RN7SKP147-201ENST00000517154 244 ntBASIC5.44□□□□□ -1.54
NUCKS1Q9H1E3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.44□□□□□ -1.54
NUCKS1Q9H1E3 AMZ2P1-203ENST00000565833 850 ntBASIC5.44□□□□□ -1.54
NUCKS1Q9H1E3 AC126323.6-202ENST00000568092 3511 ntBASIC5.44□□□□□ -1.54
NUCKS1Q9H1E3 MIR3691-201ENST00000578066 90 ntBASIC5.44□□□□□ -1.54
NUCKS1Q9H1E3 RN7SL52P-201ENST00000584271 284 ntBASIC5.44□□□□□ -1.54
NUCKS1Q9H1E3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NUCKS1Q9H1E3 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.44□□□□□ -1.54
NUCKS1Q9H1E3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.44□□□□□ -1.54
NUCKS1Q9H1E3 AL158827.2-201ENST00000602494 330 ntBASIC5.44□□□□□ -1.54
NUCKS1Q9H1E3 AC087783.2-201ENST00000605070 562 ntBASIC5.44□□□□□ -1.54
NUCKS1Q9H1E3 MIR8069-1-201ENST00000616627 86 ntBASIC5.44□□□□□ -1.54
NUCKS1Q9H1E3 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.44□□□□□ -1.54
NUCKS1Q9H1E3 MIR8069-2-201ENST00000621412 86 ntBASIC5.44□□□□□ -1.54
NUCKS1Q9H1E3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.44□□□□□ -1.54
NUCKS1Q9H1E3 AL691447.3-201ENST00000635020 330 ntBASIC5.44□□□□□ -1.54
NUCKS1Q9H1E3 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NUCKS1Q9H1E3 DHX9P1-201ENST00000436565 3076 ntBASIC5.44□□□□□ -1.54
NUCKS1Q9H1E3 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 RNU6-81P-201ENST00000365608 104 ntBASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 RNU1-106P-201ENST00000384382 164 ntBASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 SNORD115-46-201ENST00000390982 71 ntBASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 RNU11-4P-201ENST00000391149 133 ntBASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 Y_RNA.592-201ENST00000410274 109 ntBASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 RPL36AP10-201ENST00000421785 322 ntBASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 AC006946.1-201ENST00000429106 328 ntBASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 AL445305.1-201ENST00000432577 575 ntBASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 PTMAP6-201ENST00000439110 327 ntBASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 RPL23AP33-201ENST00000442301 452 ntBASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 AL354714.3-201ENST00000447284 493 ntBASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 AC239809.1-201ENST00000450470 217 ntBASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 NDUFB4P10-201ENST00000452541 359 ntBASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 RPS17P2-201ENST00000461663 408 ntBASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 AC069113.1-201ENST00000517763 267 ntBASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 AC090151.1-201ENST00000520784 730 ntBASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 AC174048.1-201ENST00000603389 144 ntBASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 AC093799.2-201ENST00000610062 578 ntBASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 AL023881.1-201ENST00000621088 301 ntBASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 AC005183.1-201ENST00000603687 1979 ntBASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 AC107068.1-201ENST00000563286 4218 ntBASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 AC009951.1-201ENST00000623674 2614 ntBASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
NUCKS1Q9H1E3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 SNORA17.1-201ENST00000362945 126 ntBASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 SNORD50.2-201ENST00000365465 70 ntBASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 Y_RNA.458-201ENST00000384240 102 ntBASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 Y_RNA.533-201ENST00000384596 114 ntBASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 RNU4-65P-201ENST00000410473 140 ntBASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 AL160275.3-201ENST00000423876 471 ntBASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 KNOP1P3-201ENST00000446933 426 ntBASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 RPL7P23-201ENST00000493874 747 ntBASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 SERF1AP1-201ENST00000514575 187 ntBASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 Y_RNA.719-201ENST00000517156 106 ntBASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 AC025884.1-201ENST00000556034 378 ntBASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 AC051619.2-201ENST00000559063 397 ntBASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 TUG1_2.1-201ENST00000614234 87 ntBASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 RLIMP1-201ENST00000339626 1680 ntBASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 AL133243.3-201ENST00000617415 3004 ntBASIC5.42□□□□□ -1.54
NUCKS1Q9H1E3 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NUCKS1Q9H1E3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
NUCKS1Q9H1E3 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.41□□□□□ -1.54
NUCKS1Q9H1E3 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
NUCKS1Q9H1E3 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUCKS1Q9H1E3 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
NUCKS1Q9H1E3 RNU6-1317P-201ENST00000364582 104 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms