Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC117522.1-201ENST00000509821 380 ntBASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 RNU1-61P-201ENST00000516107 151 ntBASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 AC090572.1-201ENST00000519251 160 ntBASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 OR4R1P-201ENST00000529879 463 ntBASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 AC016957.1-201ENST00000534895 309 ntBASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 ARL2BPP2-201ENST00000550907 489 ntBASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 AL359212.1-201ENST00000556608 614 ntBASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 ZNF192P1-203ENST00000565888 810 ntBASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 AC135507.2-201ENST00000612443 309 ntBASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 AC233309.1-201ENST00000619522 751 ntBASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 Y_RNA.481-201ENST00000384373 102 ntBASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 RN7SKP53-201ENST00000411337 315 ntBASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 HMGB1P27-201ENST00000431429 603 ntBASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 RPS20P5-201ENST00000434808 360 ntBASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 AC126182.1-201ENST00000478134 357 ntBASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 AL049874.1-201ENST00000489560 388 ntBASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 RN7SKP258-201ENST00000517151 304 ntBASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 RN7SKP289-201ENST00000517244 295 ntBASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 HMGB1P41-201ENST00000520234 440 ntBASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 AP001893.2-201ENST00000526949 202 ntBASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 AC124947.2-202ENST00000552735 133 ntBASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 MIR5004-201ENST00000579078 107 ntBASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 AP003465.2-201ENST00000602571 373 ntBASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 AC174048.1-201ENST00000603389 144 ntBASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 AC012507.3-201ENST00000603556 477 ntBASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 AC103858.2-201ENST00000621471 543 ntBASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 CR381653.2-201ENST00000624041 768 ntBASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 AC005609.4-201ENST00000625071 447 ntBASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 MIR6863-201ENST00000636112 90 ntBASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 MFSD8-233ENST00000641482 4860 ntBASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.3□□□□□ -1.72
RTFDC1Q9BY42 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 Y_RNA.41-201ENST00000362646 102 ntBASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 RNA5SP374-201ENST00000362939 125 ntBASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 RNU6-1120P-201ENST00000362988 108 ntBASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 Y_RNA.516-201ENST00000384541 124 ntBASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 NDUFS5P1-201ENST00000405668 289 ntBASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 RNU2-36P-201ENST00000410361 191 ntBASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 RNU2-39P-201ENST00000410604 198 ntBASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 BX323014.1-201ENST00000412876 237 ntBASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 AL451054.2-201ENST00000420896 202 ntBASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 AL451074.3-201ENST00000437709 472 ntBASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 Z75741.1-201ENST00000446793 314 ntBASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 HMGB3P22-202ENST00000451823 572 ntBASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 S100A11P2-201ENST00000467589 312 ntBASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 RN7SL504P-201ENST00000494496 287 ntBASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 AC139783.2-201ENST00000504847 1145 ntBASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 SNORA70.16-201ENST00000516390 95 ntBASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 RN7SKP209-201ENST00000516888 304 ntBASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 RNA5SP291-201ENST00000517222 105 ntBASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 MIR5680-201ENST00000577577 84 ntBASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 AC002545.1-201ENST00000592511 181 ntBASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 AL137843.1-201ENST00000605078 385 ntBASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 AL136363.1-201ENST00000605349 337 ntBASIC4.29□□□□□ -1.72
RTFDC1Q9BY42 AL021997.1-201ENST00000605757 193 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms