Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 RNU5A-1-201ENST00000362698 116 ntBASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 Y_RNA.100-201ENST00000363141 102 ntBASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 Y_RNA.356-201ENST00000365475 113 ntBASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 MIR199A2-201ENST00000385289 110 ntBASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 MIR1183-201ENST00000408856 89 ntBASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 RN7SKP32-201ENST00000410167 303 ntBASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 AC018630.2-202ENST00000422992 927 ntBASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 HMGB1P27-201ENST00000431429 603 ntBASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 AL365400.1-201ENST00000431854 640 ntBASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 HMGB3P22-202ENST00000451823 572 ntBASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 RPL21P8-201ENST00000465083 535 ntBASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 TRBV1-201ENST00000476502 284 ntBASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 AC110792.1-201ENST00000491826 472 ntBASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 RNU6-677P-201ENST00000516914 101 ntBASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 AC109635.4-202ENST00000531666 412 ntBASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 AL137161.1-201ENST00000532231 390 ntBASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 AL355836.1-201ENST00000555951 870 ntBASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 MIR4719-201ENST00000585233 84 ntBASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 AC010928.3-201ENST00000587712 541 ntBASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 AC093227.2-201ENST00000589357 285 ntBASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 VN1R80P-201ENST00000597126 338 ntBASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 AL117336.2-201ENST00000602435 335 ntBASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 AL670379.4-201ENST00000605279 254 ntBASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 AL365204.3-201ENST00000612448 685 ntBASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 TPTE2P4-201ENST00000258589 1605 ntBASIC3.66□□□□□ -1.82
CTHRC1Q96CG8 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.82
CTHRC1Q96CG8 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
CTHRC1Q96CG8 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.65□□□□□ -1.82
CTHRC1Q96CG8 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 DEFB108F-201ENST00000344638 222 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 Y_RNA.166-201ENST00000363730 102 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 RNU6-694P-201ENST00000364071 147 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 Y_RNA.373-201ENST00000365600 103 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 RNU6-213P-201ENST00000384051 104 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 MIR514A2-201ENST00000385131 88 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 MIR514A3-201ENST00000385132 88 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 RNU6-628P-201ENST00000410675 107 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 RNA5SP111-201ENST00000411386 101 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 AC079780.1-201ENST00000428259 207 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 USP9YP7-201ENST00000436723 430 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 AC020550.1-201ENST00000447385 163 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 USP9YP32-201ENST00000452432 430 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 RPS24P6-201ENST00000452670 400 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 RNU7-180P-201ENST00000459240 63 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 HMGN2P26-201ENST00000463169 339 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 HSPE1P6-201ENST00000479457 291 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 AC026402.1-201ENST00000513642 170 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 RN7SKP60-201ENST00000516985 239 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 RN7SKP258-201ENST00000517151 304 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 IGKV2D-23-201ENST00000518179 286 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 BTF3P12-201ENST00000519620 469 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 PSMA3P-201ENST00000555485 635 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 AC037471.2-201ENST00000564941 598 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 AC106785.1-201ENST00000565935 262 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 MIR4286-201ENST00000580651 93 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 AC008521.1-201ENST00000587471 187 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 AC005255.1-201ENST00000593748 216 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 AL138889.2-201ENST00000603883 242 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 AL359547.2-201ENST00000615810 418 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 AC009248.2-201ENST00000619826 254 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 AL360181.4-201ENST00000621752 134 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 AC090617.10-201ENST00000624308 134 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 AL359697.1-201ENST00000624879 587 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 PRO1804-201ENST00000623780 2050 ntBASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CTHRC1Q96CG8 SDAD1P2-201ENST00000441308 2028 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms