Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 RNU6-393P-201ENST00000384475 107 ntBASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 Y_RNA.579-201ENST00000390939 94 ntBASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 RNY4P36-201ENST00000391116 96 ntBASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 MIR548P-201ENST00000408336 84 ntBASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 MIR548F5-201ENST00000408421 86 ntBASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 BX682237.1-201ENST00000415016 335 ntBASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 RPL21P91-201ENST00000429231 479 ntBASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 RPL23AP69-201ENST00000431134 458 ntBASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 AC008264.1-201ENST00000447612 367 ntBASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 RNU7-167P-201ENST00000459160 62 ntBASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 HMGN1P10-201ENST00000474557 553 ntBASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 AC079140.5-201ENST00000507882 310 ntBASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 AC104136.1-201ENST00000512969 394 ntBASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 RNA5SP154-201ENST00000516193 111 ntBASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 SNORA31.22-201ENST00000517204 135 ntBASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 RANP9-201ENST00000519957 271 ntBASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 AC069240.1-201ENST00000548774 375 ntBASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 IMMP1LP2-201ENST00000552954 492 ntBASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 AC090115.3-201ENST00000553218 849 ntBASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 TVP23BP1-201ENST00000557500 617 ntBASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 RN7SL600P-201ENST00000581811 299 ntBASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 MIR3672-201ENST00000584290 82 ntBASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 MIR6715B-201ENST00000637172 77 ntBASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 MTND5P42-201ENST00000637720 498 ntBASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 SDAD1P2-201ENST00000441308 2028 ntBASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 MIR372-201ENST00000362225 67 ntBASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 RN7SKP44-201ENST00000363602 316 ntBASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 SNORA4.3-201ENST00000365564 137 ntBASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 AL359837.1-201ENST00000381357 287 ntBASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 SNORD116-29-201ENST00000384516 83 ntBASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 MIR134-201ENST00000385258 73 ntBASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 RNA5SP219-201ENST00000390940 113 ntBASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 SNORD70.1-201ENST00000391007 85 ntBASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 AC080125.1-201ENST00000414888 684 ntBASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 SNAP23P1-201ENST00000433229 246 ntBASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 FABP5P14-201ENST00000437273 393 ntBASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 RPL5P30-201ENST00000465511 891 ntBASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 RPL35AP15-201ENST00000468042 339 ntBASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 AP001086.1-201ENST00000494882 321 ntBASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 AC025445.1-201ENST00000502728 300 ntBASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 MTND5P5-201ENST00000503764 376 ntBASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 RNU6-1045P-201ENST00000516321 107 ntBASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 Y_RNA.689-201ENST00000516589 107 ntBASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 RNU6-840P-201ENST00000517275 65 ntBASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 ERHP1-201ENST00000523006 310 ntBASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 RPL23AP84-201ENST00000571193 464 ntBASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 MIR4790-201ENST00000577799 79 ntBASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 DPPA3P3-201ENST00000603842 430 ntBASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 AL160290.3-201ENST00000604869 165 ntBASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 AL162730.1-201ENST00000605734 292 ntBASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 MIR8059-201ENST00000620427 81 ntBASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RUFY4Q6ZNE9 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 SPRR2C-201ENST00000290702 219 ntBASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 RNA5SP52-201ENST00000362448 134 ntBASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 Y_RNA.135-201ENST00000363439 95 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 226.6 ms